Pseudoliparis swirei (Mariana hadal snailfish): 130201372
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Entry
130201372 CDS
T09868
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201372 (scfd1)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
130201372 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130201372 (scfd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
130201372
NCBI-ProteinID:
XP_056282321
LinkDB
All DBs
Position
11:complement(15545201..15559048)
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AA seq
632 aa
AA seq
DB search
MAASVREKQAVALKRMLNLNAALLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAVYFIMPTEENIDRICQDLRNQLYESYFLNFISAISRSKLEDV
ASAALSANAVAQVTKVYDQYLNFITLEDDMFTLCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGENMAAGQ
FSFQRPLFVLADRNVDMATPLHHTWTYQALIHDVLDYKLNRVVMEEGAGPEPSPAGARPK
KKNRKTYDLTPADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKCIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMT
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQQAPSESDLEQYKTALLDAGCDLSPL
NYIKQWKAFTKLAATPANYGNSGVKPMGLFSRVMNSGSQLVMEGVKNLVLKQHNLPVTRI
LDSLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
AKVKHGKKVVYGCSELSNAAQFTKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgtccgggagaagcaggccgtcgctctgaagcgaatgctgaacttaaac
gctgctcttctgaagaacacagcagctgagccagtctggaaggtgttgatctacgatcgg
ttcggccaggacatcatctctcctctgctgtccgtcaaggagctgagagacatgggcatc
acccttcacctgctgcttcactcggacagagacccgatcccagatgttcctgctgtctac
ttcatcatgcccacggaggagaacatcgaccgcatatgccaggacttgaggaaccagctg
tacgagtcttacttcctcaacttcatctcggccatcagcagaagcaaactggaggacgtg
gcgagcgccgcgctgtcggccaacgccgtggcccaggtcaccaaggtgtatgatcagtac
ctgaacttcatcactctggaagacgacatgttcaccctctgccatcagaacaaggagctc
atctcttaccacgccatcaaccgagccgacatccaggacacggacatggaggccatcatg
gacaccatcgtggacagtctcttctgcttcttcgtcactttgggcgctgtgcccatcatc
cgctgtccccgtggcaacgcagcagagatggtggccgtgaagttggacaagaagcttcgt
gagaaccttcgagacgccagaaacagtctgttcaccggagaaaacatggccgccgggcag
ttcagtttccagaggcctttgttcgtcctggcagatcgtaacgtggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgatgtcctggactacaagctcaac
agggtggtgatggaggagggggcggggcctgagccgtctcccgccggcgccagaccaaag
aagaagaacagaaagacctacgacctgactcctgcagacaagttctggcagaagcacaag
ggcagtccctttccagaggtggcggagtcggtccaggaggagctggacacctatagagcc
caggaggacgaggtcaagcgcctgaagtgcatcatgggtttagagggagaagatgaagga
gccatcagcatgctgtcagacaacacagccaagctcacctctgctgtcagctctctgcca
gagctgctggagaagaaacgtctgatcgacctgcacaccaacgtggccacggccgtgctc
gaccacatcaagagtcgtaaactggacgtttactttgagtatgaagagaaactgatgacc
aagtcgactttagacaaatctcttctggacatcatcagtgaccccgacgccggaaccccc
gaagacaaaatgagactcttcctcatctattacatcactgctcagcaggctccttcagag
tcggacttggagcagtacaagacggccctgttggacgccggctgcgacctttcaccactc
aactacatcaagcagtggaaggcctttaccaagctggccgccaccccggcgaactacggc
aacagtggagtgaaacccatggggctgttttccagagtgatgaacagtggctcccagctg
gtgatggagggagtgaagaacctggtgctcaaacagcacaacctaccagtcactcggatc
ctggacagcctgatggagatgaagtccaacccggaaactgacgactatcgatacttcgac
ccaaagatgctgcgaggaagcgagagctccatccccaggaacaagaacccattccaggag
gccatcgtgttcgtggtgggaggaggaaactacatcgagtaccagaacctggtggactac
gccaaggtcaaacacgggaagaaggtcgtttacggctgcagtgaactctccaacgctgcc
cagttcaccaaacagctctcccagctcggccaaaagtga
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