Pseudoliparis swirei (Mariana hadal snailfish): 130201396
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Entry
130201396 CDS
T09868
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12 isoform X1
KO
K20309
trafficking protein particle complex subunit 12
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201396 (trappc12)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
130201396 (trappc12)
BRITE hierarchy
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_16
TPR_12
TPR_17
ANAPC3
Coatomer_E
TPR_11
TPR_MalT
RPN7
Motif
Other DBs
NCBI-GeneID:
130201396
NCBI-ProteinID:
XP_056282367
LinkDB
All DBs
Position
11:7577650..7620153
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AA seq
839 aa
AA seq
DB search
MRTRVLSVSPVRSSTMDGGDAQRPVTLDITVEDVATEAPDPTEPTSSQAPCRERVPQVDS
IDLGGEFVTPQEDSSATPSESLMVKLNDQMMESVMISDSPNNSEEDDVAPMDSFLDAVEE
EEAAPEASDDKDEEKSEIGQNTTEIKQEPGGSMEKADEATKEQANTHEQVITVVSPQSDE
DSPFDFNCEEPTAQDAKGTSPQDGPVPVCTIFSHGNQPKSLVPDGFQPTLIKSPSFNMGS
GGGGGGSEAVTPSKLTAPLVCQPSPSLSKFFTDNGQVNPASDFFDSFTVPSSFISVSNPN
AEIPLGASPATIAHTPERQLSSTSSSISTPGGPLDSGAPTPSSVFGPALTESTAKAQLSP
PEAAAPAAPTRAAAPPASQPQPFNQLQAVFLGSDDPFAKALSLSEVDRRHDAWLPSEETR
KVLISVATQQYSPSFVETNPVTMPGLKFDNLQGDAVKDLMLRFLGEPAAMKRQVLTANSV
EQSFTGLKRLISSKNWRAAVDLTGRLLTAHGQGYGKAGQPTTHTTDSLQLWFVRLALLTK
LNLFQNAELECEPFGNLDHPDLYYEYYPSVYPGRRGSVVPFSMRLLHAELPQYLAKPQEA
LDRLYHLKTICLTILENLEKGLAENGSMITLTQDNRQVSLNLWRSRLSRVTYSMANCLLL
MKDYVLAVETYHSIIQYEPQQRVQLLSGIGRIFLQIGDVKTAERYFQDVETACQETGSQP
AHTTCVLMNRAFVSLSQNNYTEAHASFTEVLKVDPKNPVANNNAAVCLLYLGRLKESLGQ
LEGLVQQDPALYLHESVLFNLTTMYELESSRSTQKKQALLEAVACHEGDSFNTQCLKLV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactagggtgttatctgtcagtccagtaaggagcagcacgatggacggtggggat
gctcagcggccagtcacgttggacatcacagtggaagatgtcgccacagaagccccagac
cccacggagcccacaagcagccaggcgccctgcagagagcgtgtcccccaggtagacagc
atcgacttgggtggggagtttgtaaccccccaggaggacagcagtgctacaccgtcagag
agcctgatggtcaagctcaacgaccagatgatggagagcgttatgatttctgactcgcct
aataacagcgaggaagatgacgtggctcccatggactcctttctggatgcagtcgaggag
gaagaggctgcgccggaggcatcggacgacaaagacgaagaaaaaagtgaaatcggacag
aatactaccgagatcaaacaggagccgggtggttctatggagaaagctgatgaggccaca
aaggagcaggcaaacacacatgagcaagtcatcactgttgtttcacctcaatctgacgaa
gacagcccatttgattttaactgtgaggaaccaacagcacaagacgccaaagggacaagc
ccacaagacgggcccgtgccggtgtgcaccatattcagccacggcaaccagccaaagtct
cttgtgccagatggcttccagcccaccctcatcaagtcccccagcttcaacatggggagt
ggtggtggtggaggaggcagtgaggcagtgacccccagcaagctgacggcccccctcgtg
tgtcagcccagccccagcctcagtaagttcttcactgacaatggacaggtcaacccagcc
tccgacttcttcgattcctttacggtgccctcctccttcatctccgtctcaaaccccaat
gctgagatccctctcggtgccagcccagcaaccatagcccacacccctgagcggcagctc
tcttccacctcctcatccatctccacccctggaggacctctggactctggtgcccccacc
ccgagttcagtgtttggccctgccctgacggaatctaccgccaaggcccaactttctccg
cccgaagcagcggccccagcagctccaactcgagccgccgcccccccagcctctcagccg
cagcccttcaaccagctgcaggccgtgttcctgggcagcgatgacccgtttgcgaaggcg
ctgagcctgagcgaggtggacaggcgccatgacgcctggctgccatctgaggagacgagg
aaggtgttgatctctgtggccacccagcagtacagcccatcctttgtagagaccaaccca
gtcaccatgcccggactcaagtttgacaaccttcagggcgacgccgtaaaagacctgatg
cttcgtttcctgggagaaccggcggcgatgaagcgccaggtcctcacagccaactctgtg
gagcagtccttcacaggcctcaaacgtctcatcagcagtaaaaactggcgtgccgcggtg
gatctgacgggtcggctgctgacggctcacggtcagggatatgggaaggccggccagccg
accacccacaccaccgactcactgcagctctggtttgtgcggctggccctcctcaccaag
ctgaacctcttccaaaacgctgagctggagtgtgagccctttggcaacctggaccatcca
gacctctactatgagtactaccccagtgtttaccctgggaggagaggctccgtggtgccg
ttctccatgcggctgctgcatgccgagcttccccagtacctggccaagccccaggaggct
ctggaccgcctgtaccatctgaaaaccatctgcttgactattctggagaacttggagaaa
ggtttggctgagaatggcagcatgatcaccctaacacaggacaacaggcaagtgtctcta
aacctctggaggtctcgcctcagccgggtcacgtactccatggccaactgtctgctgctg
atgaaggactatgttctggctgtggagacctatcactccatcatccagtatgaaccccag
cagagagtgcagctgctcagcggcataggacgcatctttttacagattggagacgtaaaa
acggccgagcggtacttccaggatgtggagacggcctgccaggagaccgggagccagccg
gctcacaccacatgcgtgctgatgaacagggccttcgtctccctcagtcagaacaactac
accgaggcgcacgcgtccttcaccgaggttttgaaagttgacccgaagaaccccgtcgcc
aacaacaacgcggcggtctgcctgctctatctgggccgcctgaaggagtccctgggccag
ctggagggcctggtgcagcaggacccggcgctctacctccacgagagcgtcctcttcaac
ctgaccaccatgtacgagctggagtcgtcccgcagcacgcagaagaagcaggcgctgctg
gaggccgtggcgtgccacgagggggacagcttcaacacgcagtgcctcaaactggtctaa
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