Pseudoliparis swirei (Mariana hadal snailfish): 130201409
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Entry
130201409 CDS
T09868
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130201409 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130201409 (dkc1)
03032 DNA replication proteins [BR:
pswi03032
]
130201409 (dkc1)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
130201409 (dkc1)
Prokaryotic type
130201409 (dkc1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
130201409 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
130201409
NCBI-ProteinID:
XP_056282383
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All DBs
Position
11:complement(15161794..15167017)
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AA seq
488 aa
AA seq
DB search
MGDPEASVKRRKSKRVSEDDIGEIQQNGDFLIKPEAKAASLDTSQWPLLLKHFDKLNIRT
AHYTPLANGSNPLKRSIQDYVRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDP
KVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIESAHTLARTLETLTGALFQRPPL
IAAVKRQLRVRTIYESKLIEYDPERRLGVFWVSCEAGTYIRTLCVHMGLMLGVGGQMQEL
RRVRSGVLGEKDHMVTMHDVLDAQWQFDHNKDEAYLRRVVFPLEKLLVSFKRVVMKDSAV
NAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICTAVALMTTAVISTCDHGVVAKI
KRVIMERDTYPRKWGLGPKASKKKMMIQKGLLDKHGKPNDSTPTDWKSQYVDYSVSKATP
ESSDTPAKRKREAVDSDTETPATPSTPPPEGVKKKKKKDKKVKVEEAEPEVSSAKKKKKK
LKHEEEAE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccagaagcgtcggtgaagaggaggaagagcaagagggtctccgaagacgac
atcggggagatccagcagaacggagacttcctcatcaagccagaggccaaggcggcttcc
ctggacacatcccagtggcccctgttgctgaagcattttgacaaactgaacatccggacg
gctcattacacgccactagctaacgggagcaacccgctgaagaggagcatccaggactat
gtcaggtcgggcttcatcaacctggacaagccggccaacccgtcgtcccatgaggtggtg
gcgtggatccggaggatcctccgcgtggagaagacgggtcacagcgggacgctcgacccc
aaggttaccggctgcctgatcgtctgtgtggatcgagccacgcgattggtcaagtcccag
cagagtgccggtaaagagtacgtgggcatcgtgcggctgcacaacgccatagagagcgcg
cacaccctggcccggacattggagacgctgacgggcgcgttgttccagcggccgccgctc
atcgccgccgtgaagagacaactccgagtccgaaccatctacgagagcaagctgatcgag
tacgaccctgagaggaggctaggggtcttctgggtgagctgcgaggccgggacctacatc
cgaactctgtgtgtccacatggggctcatgctcggggtgggcgggcagatgcaggagctg
aggagagtccggtccggagtgctgggcgagaaggaccacatggtgacaatgcacgacgtg
ctggacgctcagtggcagttcgaccacaacaaggacgaggcgtacctgcgccgggtggtg
ttcccgctggagaagctgctggtgtccttcaagagggtggtgatgaaggacagcgcggtg
aacgccatctgctacggagccaagatcatgctgcccggcgtcctgcgctacgaggacggc
atcgagatgaaccaggacatcgtggtcatcaccaccaagggggaggccatctgcacagct
gttgctctgatgaccaccgccgtcatctccacctgtgaccacggcgtggtggccaagatc
aagagggtcatcatggagagggacacgtatcccaggaagtggggtctgggtcccaaggcg
agcaagaagaagatgatgatccagaaaggtctgctggacaaacacggaaagcccaacgac
agtacgcccactgactggaagagccagtatgtggactacagcgtctccaaggcgacacca
gagtcatctgacacgccagcaaagaggaagagggaggcggtcgacagcgacactgaaact
ccggcaacgcccagcacgccgccgccagagggcgtgaagaagaagaagaaaaaggacaag
aaagtaaaagtggaggaggcggagcccgaggtttcaagtgcgaagaagaagaagaagaaa
ctaaaacacgaagaagaggccgagtga
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