Pseudoliparis swirei (Mariana hadal snailfish): 130201447
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Entry
130201447 CDS
T09868
Symbol
arhgap5
Name
(RefSeq) rho GTPase-activating protein 5
KO
K13709
Rho GTPase-activating protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130201447 (arhgap5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201447 (arhgap5)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130201447 (arhgap5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
FF
NOG1
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
130201447
NCBI-ProteinID:
XP_056282446
LinkDB
All DBs
Position
11:complement(16720172..16750984)
Genome browser
AA seq
1534 aa
AA seq
DB search
MCLCITDEQNWNDILTRFTGRDRVSDERGDIMAKNKDARPPSFAVSVVGLSGTEKEKGNC
GVGKSCLCNRYIRPNADGYYTEHTSVLSTIDFGGRVVNNDHFLYWGDVSHRGDDGSDCKI
QIIEQTEFIDDQTFLPHRSTNLQPYTKRAAANKLQSAEKLMYICTDQLGLEQDFEQKQMP
DGKLNIDGFLLCIDVSKGCNRKFEDQMKFINSIYSQIIKSKKPIVVAATKCDECVDQHLR
DLQAFVASKKNLLLIETSARSNVNADVCFNALIQQLDKTRGKTKTVSYLEAYKVQRQLVA
SATDRFEKLILHTVRDYHTTWKTVITNMKGKPDYDDFITLEGSRKARNMFTKHIAQLKQE
HIKRRREEYLTTLPKTLNNLLHNLDEVEHLTWPEAQTVIRNRPDFQYWFVVLEQTPWDET
DHIAMSDRRIPFDLLDTLDGERIYHNHVQHLLSEKRRGEMKQRFKKTLERVHFICAGQPW
EEVMCFVMEDEAYKYITESDRRDVYCRHQQEIVERAKENFQEMLFEHAELFYDLDLNATP
SCDKMSEIHSVLNEEPRYRSLQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCVDLKVEQ
VLANRLVQLDHGRSNLYYNSANIDKINLCLLGREGLSQELANEIRAQSTDDEYTLDSKIY
ELELLPVDVNSTLLFSHTWVTTFKPHGCFCVFNSIESLNCIGDCIGRIRAEIAQSRRDRF
AQPLPFILILANQRDSVCKNIPILRHQGQQLANKLQCTFVDIPSMAFPRKFTEFQIKQGL
RTVLEGLKHNFDVLAPLPSIKDMSETDLRIVMCAMCWDPFGVDLILSPFLDSHCCSAGQP
GQSNTLILDKIIRDSRRRIQVTILSYHMAIGVRKDELVHGYILVYSAKRKASMATLRAFL
AEVQDVIPVQMVAITDSQADFFENDAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEV
FTPFFNEVLEKKPNIESAFLYDSSSRECTTGASEDVFPTSPHSHSPAYNTYYLESDDDNE
APPPYSPIGDDVQLLPTPSERAKYRIDLEGNEYPVHSTPVGEHERNHKVPPPVRPKPLLP
KPNVKKLDPNLLKTIEAGMRSNRRTPRGPPTHGEDVEASDNYADPVDTLLWSRGFHNDDI
YAVPDDAHSRLVKIRNSFGGFQEENGFDRRYQAGRRPSKYKHRSKILFSKTKAYQRRFQS
DSDGEESGPAMQKKKKGRAHRGSEEDPLLSPADPWKGGIDNPAITSDPEQEDKKMKKKKP
KTPKEPKKPKSSKSPKPLYPPTRRTWESNYFGVPLQNLVTPDRPIPLFINKCVDYIERTG
LTTEGLYRVSGNKTDQDNIQKLFDQDHCIDFVVMDVAVNAAAGALKAFFADLPDPLIPYS
LHPELVEAAKIVDYIERLQVLREIVKKFSPVNYQVFKYIITHLNRVSQHSKTILMTADNL
SICFWPTLMRPDFENKDTLSTTKLNQAVMEAFIVQSDYFFHGGEAVDGAGGGVGEGTPTP
THCHNMVEALLPLQLPPPLQPQQIQHTLHPDPLM
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctttgtatcactgacgagcagaactggaatgatatcttgacccgttttaccgga
cgtgaccgagtcagcgatgagcggggggatataatggccaagaacaaggatgcgcgcccc
ccgtcattcgccgttagcgtggttggcctctcggggacggagaaggagaaggggaattgc
ggcgttggcaagtcctgcctatgcaatcggtacattcgccccaatgcagacggctactac
acggagcacacctcggtgctgagcaccatagactttgggggacgcgtggttaacaatgac
cacttcctgtactggggggacgtgtcccatcgaggggacgacgggtcggactgtaaaata
caaatcatcgagcagacggagttcatcgacgaccagacgtttcttccacatcggagtacg
aacctgcagccgtacaccaagcgggcggcggcgaacaagctgcagtcggccgagaagctc
atgtacatctgcacggaccagctgggcctggagcaggacttcgaacagaagcagatgccc
gacgggaagctgaacatcgacggctttctgctctgcatcgacgtcagcaagggttgcaat
cggaagttcgaagaccagatgaagttcatcaacagcatctactcccagatcatcaagtca
aagaagcccatcgtcgtcgccgccacgaaatgcgacgagtgcgtggaccagcacctgagg
gacctgcaggccttcgtcgccagcaagaagaacctgctgctaattgagacgtcggcacgt
tccaacgtcaacgcagacgtgtgcttcaacgccctcatccagcagctggataaaaccagg
ggaaagacaaaaactgtgtcgtacctggaggcgtataaagtgcagcggcaactcgtcgcc
tcagcaacagatagatttgagaagttgatactgcacaccgtgagggattaccacaccacg
tggaaaacggtgataactaatatgaagggcaaaccggactatgatgatttcatcaccctg
gagggctccaggaaagcccgcaacatgttcacgaagcacattgcacaactgaagcaggag
cacatcaagaggcggcgggaggagtacctgacgacactacccaaaaccctcaacaacctc
cttcacaacctggacgaggtggagcacctcacttggcctgaggcgcagactgtgatccgg
aaccggcctgatttccagtactggtttgtggttctggaacagacgccgtgggacgagacg
gaccacatcgccatgagcgaccgccggatacccttcgacctcctggacacgctcgacggt
gagagaatctaccacaaccacgtccagcacctgctgtctgagaagaggaggggggagatg
aagcagcggttcaagaagacactggagagggttcactttatctgtgcagggcagccttgg
gaggaagtcatgtgcttcgtcatggaggacgaggcctacaagtacatcacggaatcagat
aggagggatgtttactgtagacaccagcaggaaatagttgaaagggccaaagagaatttt
caggaaatgctttttgagcacgccgagctgttctacgacttggatctgaatgccaccccc
agctgtgacaagatgagcgaaattcacagcgtgctgaacgaggagcccagatacagatcg
ctgcagaaacttgccccagatagagagtcgctcctcctcaaacatattgggtttgtttac
catcccacgaaggagacgtgcctgagtgggcagaactgtgttgatctgaaagtagagcag
gttttagcaaacaggctggtgcagctcgaccacgggcgctctaatctctactataacagt
gccaacatcgataagatcaacctctgcctcctgggaagggagggtctctcacaggaacta
gccaatgagatcagagcgcagtccacggacgacgagtacaccctggacagtaaaatatac
gaactggagcttcttcccgtggatgtcaattccacactgctcttcagccacacgtgggtc
accaccttcaagccacacggctgcttttgcgtttttaactccattgagtccctcaattgt
atcggagattgcattggcaggatcagagcggagatagcacagagtaggagagaccggttt
gctcagccgctaccgttcattctcatcctggcgaatcagagggacagtgtttgcaaaaac
atacccatcctgaggcaccagggccagcagcttgcgaacaagttgcagtgcacctttgtc
gacatcccctccatggcctttccacgcaagttcacagagtttcaaatcaagcagggtctc
cgcacagtgctggaggggctaaagcataactttgacgtcttggccccactgccctccatc
aaagacatgtcggagactgacctccggatagtcatgtgcgccatgtgctgggatcctttc
ggcgtcgacctcatcctctcgcctttcctggactcgcattgctgtagcgcgggtcagccg
ggccagagcaacacgctgatactcgacaagatcatcagggacagcaggaggaggatccag
gtcaccatcctctcctaccacatggccatcggcgtccgcaaggacgagctggtgcacggc
tacattttggtctactctgccaaacgcaaggcttcgatggcgaccctgcgagcgttcttg
gccgaagtccaggatgtgatccccgtccagatggtggccatcacagacagccaggcagac
ttctttgagaatgacgccatcaaggagctgatgacggagggggagcacatcgccacggag
attgcggccaagtttacggcactctactcgctgtcgcagtatcatcggcagacggaggtt
tttacgccctttttcaacgaagtgctggagaaaaagccaaacatcgagagcgccttcctg
tacgacagctcgtcccgcgagtgcaccaccggtgccagtgaagacgtcttccccacctcg
ccccatagccactccccggcctataacacctactacctggaatctgacgacgacaacgag
gccccaccaccgtacagtccaataggcgatgacgttcagcttctccccacacccagcgag
cgggccaagtaccgcatcgacctcgagggcaatgagtacccggtccacagcactcctgtg
ggagaacatgaacgcaaccacaaagtgcctccgcctgtccggcccaaaccactgctcccc
aaacccaatgtcaaaaagctagaccccaacctgctcaaaaccatcgaggccggcatgcgg
agcaaccgcaggacgccacgcggcccgccgacgcacggcgaggacgtcgaggcgtcggac
aactatgcagaccccgtggacaccttgctctggtccaggggcttccacaacgacgacatc
tacgccgtgcccgacgacgcacacagccgcctggtcaaaataagaaactccttcggcggg
tttcaggaggagaacggattcgacagaaggtatcaggctggacggcggccgtcaaaatac
aagcaccggtccaaaatcctgttcagcaagacgaaagcctaccaaagacggttccagtcg
gacagcgacggagaggagtcgggccccgccatgcaaaaaaagaaaaagggaagagcccac
cggggcagcgaggaggacccgctgctctcccccgccgacccctggaagggcgggatcgac
aacccggccatcacctcggaccccgagcaggaggacaagaagatgaagaagaagaagccc
aagacgccaaaggaacccaagaagccaaaatcctccaagtcccccaagcctctgtacccc
cccaccaggagaacctgggagagcaactattttggcgttcccctgcagaacctggtgacc
ccggaccgacccatcccgctcttcatcaacaaatgcgtcgactacatcgagcgcacaggt
ctgaccacagagggtctgtaccgggtgagtggcaacaagacggaccaggacaacatccag
aagctgtttgatcaagaccactgtatcgacttcgtggtgatggacgtggcggtgaacgcc
gctgccggggccctgaaggcgttcttcgccgacctgcccgacccgctgatcccctacagc
ctgcacccggagctggtggaggccgcaaaaatcgtggactacatcgagcgtctgcaggtc
ttgcgggagattgtgaagaagttttctcccgtcaactaccaggtcttcaaatacatcatc
acacacctcaacagggtgagccagcacagcaagacgatcctgatgacggccgacaacctg
tccatctgcttctggcccacgctgatgcgccccgacttcgagaacaaggacacgctgtcc
accaccaagctgaaccaggccgtcatggaggccttcatcgtgcagagcgactacttcttc
cacggcggcgaggcggttgacggcgccggcggcggcgtcggggagggcacgccgacgccg
acgcactgccacaacatggtggaggcgctgctgccgctgcagctgccgccgccgctgcag
ccgcagcagatccagcacacgctgcaccctgacccgctcatgtaa
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integrated database retrieval system
