Pseudoliparis swirei (Mariana hadal snailfish): 130201448
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Entry
130201448 CDS
T09868
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130201448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
EGF_DL_JAG
JAG1
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
Phage_CP76
DUF4381
Motif
Other DBs
NCBI-GeneID:
130201448
NCBI-ProteinID:
XP_056282448
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All DBs
Position
11:complement(17271011..17317648)
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AA seq
1253 aa
AA seq
DB search
MWTSPGTRVSLVSLILVLWAEVCLSTGYFELQLVSVGNPRGQLLNGDCCDAERSAAEGHC
GADECDTYFRVCLKEYQTEVTTHGPCTYGSETTKVIGGNTFQFKGAQKSGHNRNNDAGKI
LIPFQFAWPRAYTVILEAWDRDNGSHSNDDSLLIERSVFKGMMNPGEEKQPVEFRSAAAS
LAYAVRVRCDDYYYGVKCNKVCRPRDDYFGHYVCDQMGNRGCIEGWAGPDCKTALCKQGC
SLEHGGCSVPAECRCNYGWQGALCDECLPYPGCVHGTCNEPWQCTCEKNWGGLLCDKDLN
YCGTNRPCKNSGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCASGGTCHEVPSGF
ECHCPAGWSGPTCAQDTDECASGPCAQGGTCMDLENGFECLCPPQWTGKTCQIDVNECAG
KPCLSAYSCKNLIGGYHCACFRGWVGQNCDINQNSCHGQCQNGGTCKEGGARGCVCWPGF
VGRHCELQRNRCASGPCRHGGRCHALMDGFMCECPQGFAGTTCEVQNDPCGPNPCHNKAK
CHSLVSDFYCSCPDDYEGKTCSELKDHCKTNRCRVIDSCTIAVATNDTQQRVWHISSNVC
GPHGRCISLPAGNFSCSCEPGFTGTYCHENINDCASSPCENGGTCIDGINSFQCFCPEGW
EGHLCDADVNECNMNSCQNGGRCVDLVNDFYCDCVDNWKGKTCHSRESQCDASTCSNGGT
CYDHGDSFLCSCPSGRGGSTCNTAKNSTCDSGPCENGGTCVGGGDAFTCICKDGWEGATC
AQNVDDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINMDECQSSPCAGGSTCMDEI
NGYHCVCPPGYAGPRCLKFIGLGKACRHAGLQFPHGSRWEEECNACQCANGHARCSKVRC
GRRPCLLPKAAPSPDMNTGPPCPGGHECEEHQFLACFSPPCHRWGVCSTPDPPAPLHTRC
EPNSGYLDSGCARITLIFKKEKVPQGTTVENICSELRYLPVAQTLAEERALLILCDLSYS
NGDAVEVAMSFEEEGRAPDGERGRIQKAASAVINALSKRHNSTVMLAVVEVKVETQVEPP
SVGYLVPVLCVVFGVLWVFCLVVCVLWTRKRKKERERASRAADTAVNNQLLLRPSNALKD
NRDKDIRYECEKMMAPADRTCDGAEGEEGGEAQREEEDEERAPGAGEKRPPRRSSTPAGS
QDWGVTGKGGGVICTSRSGPVKAPHRTAYSPKDNRCKNLHAARLAEDVKDHYV
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtggactagtccggggacgcgcgtctctctcgtgagtctgatcctggtgctgtgggcc
gaggtgtgcctctccaccgggtactttgagctgcagctggtgtcggttgggaacccccgg
ggccagctccttaacggggactgctgcgacgcggagcgcagcgcggcggagggccactgc
ggcgccgacgagtgcgacacgtacttccgagtgtgcttaaaggaataccagacggaggtc
acgacgcacgggccgtgcacgtacggctcggaaactactaaggtcatcggtggaaatact
tttcagttcaagggcgcgcagaagagcggacacaaccggaacaacgacgcggggaagatc
ctcatcccgttccagttcgcctggccgagggcctacaccgtgatcctggaggcctgggac
agagacaacggctcacacagcaacgacgacagcctgctaatcgagcgcagcgtgttcaag
ggcatgatgaacccgggcgaggagaagcagccggtggagttccgcagtgcggcggccagc
ctggcgtacgccgtgcgcgtgcgctgcgacgactactactacggcgtgaagtgcaacaag
gtgtgccggcccagagacgactacttcggacactacgtgtgcgaccagatggggaaccgg
ggctgcatagagggctgggccgggcccgactgcaagacagccctctgtaaacagggctgc
agtctggagcacggcggctgcagcgtgccggcggaatgcaggtgtaactacggctggcag
ggcgcgctgtgtgacgagtgcctgccgtaccccggctgcgtccacgggacctgcaacgag
ccctggcagtgcacctgtgagaagaactggggcggcctgctctgtgacaaagatctgaac
tactgcggcaccaaccggccgtgtaagaacagcggcacgtgcatgaacacggaaccggac
gagtacaactgcgcctgtccagacggatactcagggaagaactgtgagatcgcggagcac
gcctgtgtctctaacccgtgtgccagcggcgggacgtgccatgaggtcccgtccggcttc
gagtgccactgcccggcgggctggtccgggcccacttgtgctcaagacacagacgagtgc
gcctccggcccgtgcgcccaggggggaacctgcatggacctggagaacggctttgagtgc
ctgtgccccccccagtggaccggcaagacctgccagatcgacgttaatgagtgtgcgggg
aagccttgcctcagtgcttactcttgcaaaaacttgattggtggatatcactgtgcctgc
tttcgtggatgggttggccagaactgtgacatcaatcagaacagctgccacggtcagtgt
cagaacggagggacctgcaaggagggcggagccagaggatgcgtctgctggccgggtttc
gtgggccggcactgcgagctccagaggaaccgctgtgccagcgggccctgcaggcacggc
gggcgctgccacgccctgatggacggcttcatgtgcgaatgccctcagggcttcgccggc
accacctgcgaggtgcagaacgacccctgcgggcccaacccgtgccacaacaaggccaag
tgccacagcctggtgagcgacttctactgcagctgccccgacgactacgagggcaagacc
tgctcggagctgaaggaccactgcaagaccaaccggtgccgagtgattgacagttgcaca
attgccgtggcgaccaacgacacccagcagcgggtgtggcacatctcatccaacgtgtgc
ggcccccacgggcgctgcatcagcctgccggccgggaacttcagctgctcctgtgagccg
ggcttcaccggcacctactgccatgagaacattaacgactgtgcgtcgtctccctgtgag
aacggaggcacctgcatcgacggcatcaactccttccagtgcttctgtccggaaggctgg
gagggccacctctgtgacgccgatgtgaacgagtgcaacatgaacagctgtcagaacgga
ggccgctgcgtcgacctcgtcaacgacttctactgcgactgcgtggacaactggaaggga
aagacctgtcactcccgcgagagccagtgcgacgccagcacctgcagcaacgggggcacg
tgctacgaccacggggactccttcctgtgcagctgcccctcgggccgggggggcagcacc
tgcaacacggccaagaacagcacatgtgactcggggccgtgtgagaacggagggacgtgt
gtcggaggcggcgacgccttcacctgcatctgcaaggacggctgggagggagccacctgt
gcacagaatgtggacgactgcaacccccacccctgctacaacggaggaatctgcgtcgat
ggcgtcaattggttccgatgtgagtgcgcaccggggttcgccggaccggactgccgcatc
aacatggacgagtgtcagtcttctccgtgtgccggcggctccacctgcatggacgagatc
aacggctaccactgcgtctgtcctccgggctacgccgggcctcgatgtctgaagttcatc
ggcctggggaaagcgtgccgtcacgccggcttgcagtttcctcacggcagccggtgggag
gaggagtgcaacgcctgccagtgcgccaacggccacgcccgctgctccaaggtgcgctgc
ggtcgccggccctgcctcctcccaaaggcggcgccctccccggacatgaacaccggaccg
ccgtgccccgggggtcacgagtgcgaggagcaccagttcctcgcctgcttctcgccgccg
tgccaccgatggggcgtgtgttcgacgcccgacccgccggcgccgctgcacacgcggtgc
gagcccaacagcggctacctggacagcggctgcgcccgcatcacgctcatcttcaagaag
gagaaagtgccgcagggcaccactgtcgagaacatctgctctgagctccggtacctcccc
gtggctcagacgctggccgaggagcgagcgctgcttatcctgtgtgacctgtcgtactcc
aacggggacgcggtggaggtcgccatgtccttcgaggaggaagggcgggcgccggacggc
gagcgcgggcggatccagaaggcggcgagcgccgtcatcaacgcgctctccaagcgccac
aacagcaccgtcatgctggccgtggtggaggtcaaggtggagacgcaggtggagccgcca
tctgtcggttacctggtcccggtgctgtgcgtggtcttcggcgtgctgtgggtcttctgc
ctcgtggtctgcgtgttgtggacccgcaagaggaagaaagagcgcgagcgagcgtcgcgg
gcggcggacacggccgtcaacaaccagctgctgctgcggccgagcaacgcgctcaaggac
aaccgcgacaaagacattcgctacgagtgcgagaagatgatggcgcccgccgacaggacg
tgcgacggcgccgagggcgaggagggcggggaggcgcagcgggaagaggaggacgaggag
agggcgccgggtgccggagagaagcgtccgccgcggaggagctccacgccggcggggtca
caggactggggggtgacgggcaaagggggtggagtcatctgcacgtcgcgcagcggcccg
gtgaaggcgccgcaccggacggcgtacagccccaaggacaaccggtgtaagaacctgcac
gccgcaaggctggccgaggacgtgaaggaccactacgtgtga
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