Pseudoliparis swirei (Mariana hadal snailfish): 130201482
Help
Entry
130201482 CDS
T09868
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00280
Valine, leucine and isoleucine degradation
pswi00650
Butanoate metabolism
pswi01100
Metabolic pathways
pswi04146
Peroxisome
Module
pswi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130201482 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
130201482 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130201482 (hmgcl)
Enzymes [BR:
pswi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
130201482 (hmgcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
130201482
NCBI-ProteinID:
XP_056282492
LinkDB
All DBs
Position
11:complement(12220822..12223793)
Genome browser
AA seq
334 aa
AA seq
DB search
MAAVMRFVNSSAFGPAMGQQYVALSLAAKAGVRAGRALPEKVKIVEVGPRDGLQNEKTIV
PTETKIHLIDMLSASGLSVIEATSFVSPKWVPQMADQVEVMKGIDRRPGVSYPVLTPNLK
GFQAAVKAGASEVAIFGAASELFSKKNINCSVEESLQRFDEVMRTAKEAGVPVRGYVSCV
LGCPYEGKVAPEKVAHVAKRLYSMGCYEISLGDTIGVGTPGSMSEMLEVVSREVPVDALA
VHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAHGASGNVATEDVVYMLHGLGIQ
TGVDLPKLMDAGAFICRTLNRKTNSKVAQATCKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcatgagatttgtcaacagcagcgcgttcggtccggcaatgggtcagcag
tacgtggcgctgagcttagcagcaaaggctggtgtaagagcaggccgtgctctcccggag
aaggtgaagatagtggaggtgggacccagagatggtctccagaatgaaaagaccatcgtg
ccaacggagactaaaatccatttgatcgacatgctgtcggcgtcggggctgtcggtcatc
gaggccaccagctttgtgtcaccaaaatgggttccacagatggcggaccaggtggaggtg
atgaaagggatcgataggagacctggagtgtcttacccggtcctcacccccaacctcaag
ggtttccaggctgctgtgaaggcaggcgcttcagaggtagccatatttggtgccgcatcc
gagctgttcagtaagaagaacataaactgctcagtggaagagagtttacagcgctttgac
gaggtcatgagaacagctaaagaggccggcgtgccagttagagggtatgtgtcatgtgtt
cttggatgtccgtatgaaggcaaggtggcacctgaaaaagttgcacatgtagccaagcgt
ctgtactccatgggctgctatgagatctctctgggggacactattggagtggggacccca
ggcagcatgagcgaaatgctggaggtggtgagcagagaggtgccagttgatgccttagcc
gtgcactgccacgatacctacggccaggccctggctaacatcctggtcgccttacagatg
ggaatcagtgtggtggactcgtcagtagccgggctgggcggctgtccctatgcccacggc
gcctctggaaatgttgcgactgaagatgtcgtctatatgctgcatggactcgggattcaa
acgggagtggacctccccaagctgatggatgctggagctttcatctgtcggaccctcaac
agaaagaccaactccaaagtggcgcaggctacctgcaagctatag
DBGET
integrated database retrieval system
