Pseudoliparis swirei (Mariana hadal snailfish): 130201515
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Entry
130201515 CDS
T09868
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130201515 (pax1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130201515 (pax1a)
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
130201515
NCBI-ProteinID:
XP_056282539
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Position
11:12522374..12526956
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AA seq
358 aa
AA seq
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MEQNYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQGDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQASAGLSYNHIYPYSYPNMSPTGTKMGSPAGVPMTA
GHMSISRAWPSAHTVSNILGIRAFMDPAAIAGMDGYPPKMEEWSSVNRAAFPVAHSVNGI
DKSAIDADIKYAQPSSTLSSYVSACAYSPTNQYGVYSGAAGGYVPPGHHHWQPQSPVLSH
PGGGMTSMHAGEIHSPMTFKHQAREGDRKPSNPMSKQQQQHHEDLNSVHGLSLATSSS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaactatggagaggtgaaccagttaggcggcgtgttcgtcaatgggcgaccc
ctgcccaacgccatacgcctgagaatagtggagctggctcagctcgggatcagaccgtgc
gacatcagccggcaactccgagtctcgcacggctgcgtgagcaagatcttggcgaggtac
aacgagacgggctccatcttacccggagccatcggtgggagcaaaccacgggtcacgacg
cctaacgtggtgaaaaacattagggaatacaaacaaggcgaccccgggatctttgcctgg
gagatccgggacaggcttttggcagatgcagtttgtgacaagtacaacgtcccgtcggtt
agctcgatcagcaggattttacgcaacaagattggaaatctctcccagcccaaccagtat
gagagcagtaagcaagcctccgccgggctctcctacaaccacatatacccctattcctac
cccaacatgtcgcccactggcactaaaatgggcagccctgctggagtaccgatgacggct
ggacatatgagcatatccagggcctggccctctgcacacaccgtcagcaacatcctcggt
atacgagcctttatggatcccgcagccattgctgggatggacggatacccacccaaaatg
gaagagtggagtagcgtcaacagggcagcgttccccgtggcgcactcggtcaacgggatc
gacaaatcagcaattgacgcagacataaaatacgcgcagccctcctcgacgctgtccagt
tacgtctcggcgtgcgcgtactctcccaccaaccagtacggggtgtacagtggggcagcg
ggtggctacgtgcccccgggccaccaccactggcagccgcagagcccggtcctgtcccac
ccaggcggcgggatgaccagcatgcacgcgggggagatccattcgccgatgaccttcaaa
caccaggcacgagagggagacagaaaaccatccaatcccatgagcaagcagcagcagcag
catcatgaagacttgaacagtgtgcatggactcagtctcgcgacctcctcctcataa
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