Pseudoliparis swirei (Mariana hadal snailfish): 130201518
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Entry
130201518 CDS
T09868
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130201518 (psen1)
04330 Notch signaling pathway
130201518 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130201518 (psen1)
Peptidases and inhibitors [BR:
pswi01002
]
Aspartic peptidases
Family A22: presenilin family
130201518 (psen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
130201518
NCBI-ProteinID:
XP_056282542
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All DBs
Position
11:complement(21372912..21384739)
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AA seq
497 aa
AA seq
DB search
MANNVEDIENNMDEQETNVASETPQQPQESAVTRVRSRGGSAGGGGGGGGGGNGSGPEQN
GQPPAARPPRVVETEEEEEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVGFYTHNDG
QRLIYTPFPEDTETVGERALNSILNAAIMITVIIVMTLVLVLLYKYRCYKVIQGWLFLSS
LLLLFLFSYIYLNEVLKNYNLAMDYFTLAVIIWNFGVVGMICIHWKGPLRLQQAYLIMIS
ALMALVFIKYLPEWTGWLILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSS
TMVWIVNMADTEWPPPKRNSTEAAAAPQPESQEAAASPPAAGSPPAAGSPPAAAATRPQD
DGGFSSTWVNQQQHQLGPLHSTDQTRREIQELPSARPPPEDDDDEERGVKLGLGDFIFYS
MLVGKASATASGDWNTTLACFIAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATD
NLVQPFMDRLALHEFYI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaatgtagaagatattgaaaacaatatggacgagcaggaaaccaacgtggcc
tcggaaaccccccagcagccacaggagtctgcagtgaccagagtccggtccagaggaggc
tcagcaggaggaggaggaggaggaggaggaggtggcaatggtagcggcccggagcagaac
ggacagccccccgccgctcggcctccgcgggtggtggagaccgaggaggaggaggaggag
gagttgaccttgaagtacggggccaagcacgtcatcatgctgttcgtccccgtgaccctc
tgcatggtggtcgtcgtggcaactataaagtccgtcggcttctacacccacaacgacggg
cagagattgatctacacgccgttccccgaagacaccgaaacggtcggcgagagagccctc
aactccatcctgaacgccgccatcatgatcaccgtgatcatcgtcatgacgctggtgctg
gtgctgttgtacaagtaccgctgctacaaggtgatccaaggctggctcttcctctcctcc
ctcctcctgctcttcctcttctcctacatttacctcaacgaggtgctgaagaactacaat
ctggccatggactacttcaccctggcggtaataatctggaacttcggcgtggtgggcatg
atctgtattcactggaaaggaccgctgcggctccagcaggcctacctcatcatgatcagc
gccctcatggctctggttttcatcaagtacctgcccgagtggaccggctggctcatacta
gccgtcatatccgtctacgatctgctggcggtgctctgtcccaaagggcctctgaggatc
ctggtggagacggctcaggagaggaacgagcccatcttcccagcgctcatctactcctcg
acaatggtgtggatcgtcaacatggccgacaccgaatggccgccgccgaagaggaactcg
acagaagcggcggcggcgcctcaaccagaatctcaagaagccgcggcctcgccgcccgcc
gcgggctcgccacccgccgcgggctcgccacccgccgccgccgccacccggccgcaggac
gacggcggcttcagctccacgtgggtcaaccagcagcagcaccagctggggccgctgcac
tccactgaccagacccggcgggagatccaggagctgccgtccgctcgccctcctcccgaa
gacgacgacgacgaggagaggggcgtcaagctgggcctcggagacttcatcttctacagc
atgctggtgggaaaggcctcggccacggccagcggcgactggaacaccacgctcgcctgc
ttcatcgccatcctcatcggcctgtgtctgacgctgctcctcctcgccatcttcaagaag
gcgctccccgctctgcccatctccatcttcttcggcctcgtcttctacttcgccacggac
aacctggtccagcccttcatggaccggctggcgctgcacgagttctacatttag
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