Pseudoliparis swirei (Mariana hadal snailfish): 130201520
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Entry
130201520 CDS
T09868
Name
(RefSeq) actin-related protein 3-like
KO
K18584
actin-related protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130201520
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130201520
09144 Cellular community - eukaryotes
04530 Tight junction
130201520
09142 Cell motility
04810 Regulation of actin cytoskeleton
130201520
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130201520
05100 Bacterial invasion of epithelial cells
130201520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201520
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130201520
04147 Exosome [BR:
pswi04147
]
130201520
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Arp2/3 complex
130201520
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
130201520
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130201520
Exosomal proteins of other body fluids (saliva and urine)
130201520
Exosomal proteins of bladder cancer cells
130201520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
130201520
NCBI-ProteinID:
XP_056282548
LinkDB
All DBs
Position
2:1105678..1126674
Genome browser
AA seq
418 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGDQAQRRMGKGVDDLDF
YIGDEAVDKPLYSTKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVLDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAIKERFGYVCPDLVK
EFSKYDTDASKWVKTYTGINSVSKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRSVDARLKMSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctggacggttaccggcgtgtgttgtcgactgcggcacaggctacaccaaactgggc
tatgcggggaacacggagccgcagttcatcgtcccgtcatgtatcgccatcaaggagtcg
gccaaggtgggagaccaggcccagcggaggatggggaagggggtggacgacttggatttc
tacatcggagatgaagccgtggacaagcccttgtattccactaagtggcccatccgtcac
ggcatcgtggaggactgggacctgatggagcgcttcatggagcagatcatcttcaagtac
ctgagggccgagcccgaggaccactacttcctcctgacagagcctcctctgaacacacca
gagaaccgagagtacacggctgagatcatgttcgagtccttcaacgtgccggggctgtac
atcgcggtgcaggctgtgctcgctctagcagcctcctggacgtccagacaggtgggcgag
aggacgctgacgggcaccgtcctcgacagcggagacggcgtgacccacgtcatccccgtg
gctgagggctacgtcatcggcagctgtataaagcacatccccatcgcgggccgggacatc
acctacttcacccagcagctgctgcgggagcgggaggtgggcatcccgccggagcagtcg
ctggagaccgccaaggccatcaaggagcggttcggctacgtgtgtccagacctggtcaag
gagttcagcaagtacgacacggacgcctccaagtgggtgaagacctacaccggcatcaac
tcggtcagcaagaaggagttcaccatcgacgtgggctacgagcgcttcctggggccggag
atcttcttccaccccgagttcgccaaccccgacttcacgcagcccatctctgaggtcgtg
gacgaggtcatccagaactgccccatcgacgtccggcgtccgctctacaagaacgtggtg
ctgtcgggaggctccaccatgttcagggacttcggccgtcgtctgcagagagacctgaag
aggtcggtggacgcgcggctgaagatgagcgaggagctgagtggaggcaaactcaagccc
aaaccaatcgacgtccaggtcatcacgcatcacatgcagagatacgccgtgtggttcggg
gggtcgatgctggcgtccaccccggagttctaccaggtctgccacaccaagaaggactac
gaggagatcgggccgagcatctgccgccacaaccccgtgttcggagtcatgtcttaa
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