Pseudoliparis swirei (Mariana hadal snailfish): 130201551
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Entry
130201551 CDS
T09868
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130201551 (atrn)
Lectins [BR:
pswi04091
]
C-Type lectins
Others
130201551 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
GBD_ATRN
Kelch_KLHDC2_KLHL20_DRC7
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_5
Lectin_C
CUB
PSI
Kelch_4
Kelch_6
EGF_TEN
Kelch_2
EGF_Teneurin
NANM
PSI_integrin
EGF_laminin
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
130201551
NCBI-ProteinID:
XP_056282588
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Position
11:complement(22471135..22634285)
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AA seq
1375 aa
AA seq
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MYGAPRRACSGSGSGGRVRSLLMLTTALLLSAAGLLSALPGVTEAKECDKPCVNGQCNAA
TGSCACLPGWVGDQCQHCGGRFRLTGPSGQLTDGPGNYKYKTKCTWLIEGQPNTILRLQF
NHFATECSWDHLYVFDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDA
AYNLTGFNISYRVNTCPNNCSGHGECRARNSTGSVHCECESNWKGGACDVPYCTADCGYP
DRGRCRDKSCVCEAGWQGPDCLVSVPANSSFWGREEYTEAGLARVSHKAVVEQGVMWVIG
GYVFNASDYHMVKAYNLSSRSWLTLEPSVHTVTPRYGHSLALHEGKIYMYGGKIDSTGNV
SSQLWVFHIQNQTWVLLSPRVKDQYAVVGHSAHIVTPLQDADGDGPVMLVMFGHCPLYGY
ISQVQEYNIGKNTWSMASTDGALVQGGYGHSSVFDPGTRGVYIHGGYKAFSANKYGLAGD
LYKFDVDKRKWTILRDSGFFRYLHTAVIVSGAMLVFGGNTHNDTSMSHGAKCFSSDFLAY
SLACDEWTALPRPDLYHDVNRFGHSAVFSDSAMFAFGGFNSLLLSDVLVYTSPSCAAFSG
PESCSQAWPGIHCVWNGTRGTCLPWEGDGGEQQQLPASCNSRSYADERCEQYTDCYSCTA
NTNGCQWCSSQCLSLGSNCTSATGAIGEYDVCPKDNPSYVCNKKTSCKSCAVDQNCQWEP
RNQECISLPENVCGESWHLVGNSCLKFLTAKDSYDNAKLACRSHNAVLASLTTQKEVDFV
LKELQMMSVAYKSTVTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYLAE
PASSGLKAQTCINPVNGSLCERPANHSAKQCRTACAMRATCSECTSSSSECMWCSNMKQC
VDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLDQPGCGWCTDPSNTGRGQCIE
GSYRGPFQTSVPAPSTLPGLPAGPQPALNASMCPSEAKYNWSFIHCPACQCNGHSQCVNE
SACEKCEDLTTGRHCESCISGFYGDPTNGGSCQPCKCNGHASMCNPNNGKCFCTTKGIKG
DRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDLD
MFINASKNFNLNITWATSFTAGTQSGEEIPIVSRSSIKEFKDSFSNENFDFRNSPNITFF
VYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRRE
QLLREMQQMASRPFATINVALETEDEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVR
LPRGTGGIPPPGQSGLAVASALVDVSQQMCSGYKEKFGGLRNRKQQPAAQPSTCI
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgccgcggcgggcctgctccggctccggctccgggggtcgcgtccggagc
ctcctgatgctgacgaccgcgctcctgctctcggccgccgggctgctctccgcgctgccc
ggcgtcaccgaggcgaaggagtgcgacaagccgtgcgtgaacgggcagtgcaacgccgcc
accggcagctgcgcgtgcctccccggctgggtcggggaccaatgccagcactgcggaggg
agattcaggttgacggggccctctggtcagctgaccgacgggccgggaaactacaagtac
aaaaccaagtgcacctggctgatcgagggacagcccaacacaatcctccggctgcagttc
aaccactttgccaccgagtgcagctgggaccacctctacgtgttcgatggagactccatc
tacgcccctctgctcgccgccttcagcggtctgattgttcccgagcgttacgggaacgag
acggttcccgaggtggtgtctcagtccggctacgccctgctgcacttcttcagcgacgcc
gcctacaacctgaccggcttcaacatttcctacagggtgaacacatgtcccaacaactgc
tcgggccacggcgagtgccgcgcgaggaactccaccggctcggtgcactgcgagtgcgag
agcaactggaagggcggagcctgcgacgtcccctactgcacggccgactgcggctacccc
gaccgaggccgctgccgggacaagagctgcgtctgcgaggccgggtggcaaggtccagac
tgcctcgtctcggtgccggccaactcgtccttctggggccgggaggagtacaccgaggcc
gggctggcgagggtttcccacaaggccgtggtggagcagggcgtcatgtgggtcatcgga
ggctacgtcttcaacgcctccgactatcacatggtcaaagcgtataacctcagcagcagg
agctggctgaccctcgagccctccgtccacaccgtcacgccgcgatacggccactcgctg
gctctccacgagggtaaaatctacatgtacggaggaaagatcgactccacgggaaacgtg
tccagccagctgtgggtcttccacatccagaaccagacctgggtcctcctgagcccccgg
gtcaaggaccagtacgccgtggtggggcactcggcccacatcgtgacccccctccaggac
gcggacggagacggccccgtcatgctggtgatgttcgggcactgccccctgtacggctac
atcagccaggtgcaggagtacaacatcggcaagaacacgtggagcatggcgagcacggac
ggcgctctggtccagggcggctacggccacagcagcgtgttcgaccccggcaccagaggc
gtctacatccacggcggctacaaggccttcagcgccaacaagtacggcctcgccggagac
ctgtacaagttcgacgtggacaagaggaagtggaccattctgcgagacagcggcttcttc
cggtacctccacacggcggtgatcgtgagcggggcgatgctggtgtttggaggaaacacg
cacaacgacacgtccatgagccacggcgccaagtgcttctcctccgacttcctcgcctac
agtctggcgtgcgacgagtggacggcgctgccccggccggacctctaccacgacgtcaac
cgcttcgggcactcggcggtcttcagtgacagcgccatgtttgcgttcggcggcttcaac
agcctgctgctcagcgacgtcctggtgtacacgtcgcccagctgcgcggccttctccggc
ccggagtcctgcagccaggcctggccggggatccactgcgtctggaacggcacccgaggg
acctgcctgccctgggagggcgacgggggcgagcagcagcagctcccggcctcctgcaac
agccgatcgtatgctgacgagcgctgtgaacagtacaccgactgctacagctgcacggcc
aacaccaacggctgccagtggtgctccagccagtgtctgtctctgggaagcaactgcact
tctgccacgggggccataggggagtacgacgtttgccccaaggacaacccgtcgtacgtg
tgcaacaagaaaaccagctgcaagagctgcgctgtggaccagaactgtcagtgggaacct
cgcaaccaggagtgcatctcactgccagagaacgtgtgcggggaaagctggcacctggtg
ggaaactcgtgtctgaagttcctcacggcgaaggactcgtacgacaacgccaagctggcc
tgcaggagccacaacgccgtcctggcctcgctcaccacgcagaaggaggtggactttgtc
ctcaaggagctgcagatgatgagcgtggcgtacaagtccaccgtgacgccgtgggtgggg
ctcaggaaaatcaacgtgtcgtactggtgctgggaggacatgtcgcccttcaccaacacc
accctgcagtggctccccggggagcccagcgacgccggcttctgcggctacctggccgag
ccggcgtccagcggactgaaggcccagacctgcatcaacccggtgaacggcagcctgtgc
gaacggccagccaatcacagcgccaagcagtgccggacggcgtgcgccatgagagccacc
tgcagcgaatgcaccagcagcagctcggagtgcatgtggtgcagcaacatgaagcagtgc
gtggactccaatgcctacgtggcctccttccccttcggccagtgcatggagtggtacacc
atgaacagctgtccaccggagaactgctccggctaccggacgtgcggccagtgtctggac
cagccgggctgcggttggtgcaccgaccccagcaacacgggccgaggtcagtgcatcgag
ggctcgtaccgcgggcccttccagacctcggtgccggcgccgtccaccctccccggcctg
cccgccggcccgcagcccgccctcaacgccagcatgtgccccagcgaagccaagtacaac
tggtccttcatccactgcccagcctgtcagtgcaacgggcacagccagtgcgtcaacgag
agcgcgtgcgagaagtgcgaggacctgacgaccggccgacactgcgagagctgcatctcc
ggcttctacggagatccgaccaacgggggcagctgccagccctgcaagtgcaacggccat
gccagcatgtgcaaccccaacaacgggaagtgcttctgcaccacgaagggcatcaaagga
gatcgctgccacctgtgtgaagtcgagaatcgttaccaaggcaaccccctcaaaggaaca
tgctactacacgctcctcatcgactaccagttcaccttcagcctgtcgcaggaggacgac
cgctactacaccgccatcaacttcgtggccacacctgaggagccaaaccgcgatctggac
atgttcataaacgcttcgaagaacttcaacctgaacataacctgggccacgagcttcacc
gcaggcactcagtccggcgaggagatccccatcgtctcccggagcagcatcaaggagttc
aaagacagcttctccaacgagaactttgacttccgcaacagcccaaacatcaccttcttc
gtctacgtcagcaacttcacgtggcccattaagatccaaatcgccttctcgcagcacagt
aacttcatggacctggtgcagttctttgtcacgttcttcagctgcttcctgtcgctgctc
ctcgtggccgccgtggtctggaagatcaaacagagctgctgggcgtcacggcgacgagag
caactgctgagggagatgcaacagatggccagccggcctttcgccaccatcaacgtcgcc
ctggagacggaggacgagccgcctgacctgataggaggaaatgtcaagtccgtcccgaag
cccatcgccctggagccgtgcttcggcaacaaagccgccgtgctgtccatcttcgtgcgg
ttacccagaggcaccggcggcatccctcccccaggacagtccggtctggcggtggccagc
gcgctggtggacgtgtcccagcagatgtgttcgggctacaaggagaagttcggaggcctg
aggaaccgcaagcagcagccggccgcacagccgtccacctgcatctga
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