Pseudoliparis swirei (Mariana hadal snailfish): 130201642
Help
Entry
130201642 CDS
T09868
Name
(RefSeq) gamma-2-syntrophin-like
KO
K24065
gamma-syntrophin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130201642
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
130201642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Syntrophin_4th
PDZ_6
PH_17
PDZ_2
CC_CEP152-bind
Motif
Other DBs
NCBI-GeneID:
130201642
NCBI-ProteinID:
XP_056282699
LinkDB
All DBs
Position
11:complement(10002192..10076275)
Genome browser
AA seq
521 aa
AA seq
DB search
MLCRLDVGTKSGIALLYNEETNNTYDVCLKLTKEVLTIQKLDVVCTSESESPVNHRTVVL
RRQATGGLGLSIKGGAEHNVPVVISKIFKDQVADQTGTLFVGDAVLQVNGINVEPCTHEE
VVHLLRTAGDEVTITVRYLREVPSFLKLPLGSPGPSSDHSRVSSLLFDSGLHLNGNGNNT
APSPPSPSANGPKYEKRWLDAVSLPLLMARVSRYKAGTDQLRSNCFEVFALDGAGANILQ
CCTAAESTDWLQAISTNIHELTRENIKIINKFCSSDDQIVHMGWACESHEGSAAGRTSAF
KYLALRGPYFNIFTSPPLSAGDWGPAETTYNLYEVLFKVHKLWMAEDCWLQARLYLGLEH
SLEQQDVESLCFSILVGHGQSHTFRVELATDLAVWEKSFQRAVCWEVQRIRSKSYMCSSQ
GNVLCFTLDFRSGFTCSEGTSKTALWRYKFSQLKGSSDDGKTRVKLLFKNAESNQIEMKE
LEFANLTAVLHCIHSFIAAKVASMDPLFMCSQSLPGNYMNT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttatgtcgcctcgatgtagggacaaaatctggaattgctttgctgtacaacgaggag
accaacaatacctacgacgtctgcctgaaactgaccaaagaggtattaaccatacagaag
ctggacgtggtttgcaccagtgaaagtgaatcccccgtaaatcacagaactgttgtactg
cgacgacaggcgactggcgggctgggcttaagcatcaagggaggtgcagagcacaacgtg
ccggtggttatttcaaagattttcaaagatcaagtagccgatcagacggggacgctgttc
gtcggggacgccgtgctgcaggtcaatggcataaatgtggagccctgcacacacgaggaa
gttgttcacctcctgcgcaccgcaggcgatgaggtcaccatcaccgttcgctacctgcga
gaagttccatcatttctcaaactgcctctaggttctcccgggccgtcctccgatcacagc
cgagtgtcctcgctcctctttgacagcggcttacatctcaatggaaacgggaacaacaca
gctccgtcgccgccttcgccctcagccaacgggccaaagtatgagaagcgctggctggac
gccgtctcgctgcccttgttgatggccagagtctccagatacaaagccggcaccgatcaa
ttaaggtccaactgttttgaagtcttcgccttggatggagccggcgccaatattcttcaa
tgttgcaccgctgcagaaagcaccgactggctgcaagcaatatccacaaacatccatgag
ctgacacgggagaacataaagatcatcaacaagttctgctcttcagatgaccagattgtt
cacatgggctgggcgtgtgaaagccacgagggcagcgccgctgggagaacctcggcattc
aagtatctggcactgagaggaccatattttaatatcttcacaagccccccgctcagcgcc
ggcgactggggcccagcagaaacaacgtacaacctatatgaggttctgttcaaggtccac
aagctgtggatggccgaggactgctggctgcaggcgaggctctacttggggctggagcac
tcgctcgagcagcaggacgtggagtccctgtgcttcagtattctggtcgggcacggccag
agccacaccttccgggtggagctggctacggacctggccgtctgggagaagtccttccag
agggccgtctgctgggaggtgcagcggatacgatccaaaagctacatgtgcagcagccag
ggaaacgtgctgtgcttcaccctggatttcagatcagggttcacctgctcggaaggaact
tctaagaccgcactgtggcgatataagttctctcaacttaaaggctcctccgatgacggg
aaaaccagggtaaagctcctcttcaagaatgctgaaagcaaccaaatagagatgaaggaa
ctggagtttgctaacctaacagccgtccttcactgtatacattcttttatcgctgccaaa
gtggcctccatggaccctctcttcatgtgcagtcaaagcctacctggaaattacatgaac
acttaa
DBGET
integrated database retrieval system
