Pseudoliparis swirei (Mariana hadal snailfish): 130201643
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Entry
130201643 CDS
T09868
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130201643 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130201643 (tbpl2)
03021 Transcription machinery [BR:
pswi03021
]
130201643 (tbpl2)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
130201643 (tbpl2)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130201643 (tbpl2)
RNA polymerase III system
TFIIIB
130201643 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
130201643 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
130201643
NCBI-ProteinID:
XP_056282700
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All DBs
Position
11:15309001..15311917
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AA seq
299 aa
AA seq
DB search
MDESALERYFDDSIANDYGFLGEELDPHSPAPSGTGPALSHLPVKAGEELDLSFLPDEVP
DDATADSRPVALDVSQDSGIGLDHNSQDAAAEDPQQGPAPFCPMTPMTPMTPMTPVTERS
GIIPMLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIRDPRTTSLIFSSGKM
VCTGAKSEEHSRLAARKYARVVQKLGFPARFLDFKIQNMVASCDVCFPIRLEGLVLTHQQ
FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKEREEIYEAFENIYPILRGFRKQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcggcgctggaacgttacttcgatgactccatcgctaacgactatggtttt
ttgggggaggaacttgacccccatagccccgccccctcaggaacgggtccagccctttct
cacctgcccgtgaaggcgggggaggagctcgacctcagcttcctccccgacgaagtccct
gatgatgcaacagccgacagtcggcccgtcgctctagacgtgtctcaggacagcggcatc
ggtctggaccacaactcccaggatgcagcagcagaagacccccagcaggggccggccccc
ttctgccccatgacccccatgacccccatgacacccatgacccccgtgacggagaggtca
ggaatcatccccatgttacagaacatcgtttccacagtgaacctcgggtgtcctctggat
ctgaagttcatcgctctgcaggccagaaatgccgaatacaacccaaagcgcttcgcggcc
gtcatcatgaggatcagagaccccagaaccacatcgctgatcttcagctccggaaagatg
gtctgtacaggagccaaaagtgaggagcactcccgactagcagccaggaagtatgcccgt
gtggttcagaaactcggctttccggctcgtttcctggactttaagatccagaacatggtg
gccagctgcgacgtttgcttcccgatccggctggaggggctggtgctgacccaccaacag
ttcagcagctatgaaccagaactgttcccgggcctcatctaccggatggtgaagcctcgc
atcgtgctgctcatcttcgtgtcggggaaagtggttctgacgggagccaaagagcgagag
gagatctacgaagcgtttgagaacatttacccgattctgagaggcttcaggaagcagtga
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