Pseudoliparis swirei (Mariana hadal snailfish): 130201717
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Entry
130201717 CDS
T09868
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00520
Amino sugar and nucleotide sugar metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
130201717
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130201717
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
130201717
Glycosyltransferases [BR:
pswi01003
]
Polysaccharide
Structural polysaccharide
130201717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
ChitinSynthase_IV_N
DUF5131
Motif
Other DBs
NCBI-GeneID:
130201717
NCBI-ProteinID:
XP_056282823
LinkDB
All DBs
Position
1:19468203..19476475
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AA seq
1264 aa
AA seq
DB search
MIKLLKFISLCFVAITVFGLAFCSKASFLLLITLSNEGTKTLPDDMRPVALLCIGCIIIS
SSVLIFLKSLWKACYKTSKLPRPTTIAMVLFFEFLVSMGSAILTIIAMPHLDIVTNITIL
SSVAIVSALLQVITQCTAKQTNRFLAPSITALILILLGYGLFVYLYITKDLNDTKTIIWV
GLAVGGSILMSLNWWENYFRLISQNSSSVFLSLLMIDVKKCQNMLNIMSSLLRIAVTATV
LGAYVHLDGMDWKIVTSIPTRETRIIAIIIGVQLVSSSLCHWFSLVACKMHALRRCFILP
LYFASLAIMVFFVVPVIVYYQDYKTSLNGTSIDFAGYCSQVVDTRNQSLNGSVFPGLVLD
VTHTLCFLDMSDIADIGILTGLSVSWWLGLVLTTLHLWYLTVHRIQRTQDLFVRRLYEGP
FIEQSLLLNTRFDIQTRHRKKINTFETSMLYLCATMWHETYDEMMNIIISIFRLDKYRPK
TEPTHTDFTFETHIYFDDAFIHVEGSEGHHLNTYGEDLLEILAEVYGIFTNIDEKYFVKK
QHIPDQKIIRTPYGGRLVITMPHGNVIIVHFKDKTLIRHKKRWSQVMYLYYLLGWKLMGK
HYARWAKGADEAELKAAVQKEKHNTYILALDGDTDFQPASVMLLIDRLKMYPHVGAACGR
IHPTGAGPAVWFQKFEYAVSHWLQKTAEHVIGCVLCSPGCFSLFRAEALMDDNVMKKYST
KSTEASHYIQYDQGEDRWLCTLLLKQGWRVEYNAASDAYTSAPEDFKELYNQRRRWGPST
MANVVDLLGSTSIVSKRNPSMSKPFMFYQLFGIISAVLAPATICLLIAGSLTFIVTLDNN
SALVLSVIPPAIYLVICFNVKSNTQIQIAAFMSVIYAFLMLVVSMTIIGAMMKDRTILTP
SSIFVIAMATIYIITAIMHPQESHLVFHGFLYILCIPSAYLLLTIYSMVNMNNVSWGTRE
TKPAGGAATPEPAAKETKTQQAKSSFQRFFAWCKCCKNSNYRAGTMQASVNQDNLIIEVE
QPERQPQNSIVDNSPQDEAPQAEPVLPHPSQCFVTQLQSKSTDMQLVEESLDEEENKFFI
DLQKKYLEPLKDDKERQKKITNELRELRNKVNFAFFITNCIWLVATFTLQLFDASFSIRV
PKLDVNLQDTGEDVQIDPIGFMFILGFATSVTIQFLTMFYHRINTLIHYVAFLDTEGTDY
KIQPVETYKPPKKVSKKMSEFDSISDTKSNFSVATTADEDFDDESDFEEESDDEFYEDIP
GTSL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactgctgaagttcatctctttgtgcttcgtagccataaccgtgtttggattg
gccttctgcagcaaggcttcattcctcctcctcatcaccttgtccaacgagggcacgaaa
accctccccgatgacatgaggcccgtcgcgctgctttgtatcggctgcatcatcataagt
tccagcgtcttgatatttttaaaaagcctctggaaggcgtgctacaaaacatcaaagctg
ccgaggccgacgacgattgccatggttctgttctttgagttcctggtgtctatgggctcg
gcgattctaaccatcatcgcgatgccgcacctggacatcgtgaccaacataacgatcctg
agcagcgtggccatcgtctcggcgctcctccaggtgatcacgcagtgcaccgccaagcag
accaaccgcttcctggcgccctccatcaccgccttgatcctcatcttgctcggttacggc
ctgttcgtctacctgtacatcacgaaggatctcaatgacaccaagaccatcatttgggtg
ggactggctgtcggtgggtctatcttgatgtctttgaactggtgggagaactacttcagg
ctgatcagccagaacagcagctccgtcttcctcagcctgctgatgatagacgtgaaaaag
tgccagaacatgctgaacatcatgtccagcctgctccggatcgcggtgaccgccaccgtg
ctcggagcctacgtacatctggacggaatggactggaaaatcgtgacctccatcccaacc
cgcgagacaagaattatagccatcatcatcggggtccagctagtctcctcctcactctgc
cactggttttcattggtggcctgcaagatgcacgccctgcgccggtgcttcatcctgcct
ttgtacttcgcctctctggccatcatggttttcttcgtcgtccccgtcatcgtttactat
caagactacaaaacgagcctgaacgggacctcgatcgacttcgcaggctactgcagccaa
gtcgtcgacacaagaaaccaaagcctgaacggcagcgtgttcccgggcctggttctggat
gttacacacactctgtgcttcctggacatgtccgatatagccgacatcggcatactgaca
gggttatccgtctcctggtggctcggtcttgtgttgaccaccctccatctgtggtacctc
accgtgcatcgtatccagaggacccaagacctgtttgtaaggaggctgtacgagggaccc
tttattgagcagtccctcctcctcaacacccgattcgacatccagacgagacacaggaag
aaaatcaatacatttgagacatcgatgttgtatctatgcgcgaccatgtggcatgaaacc
tacgacgagatgatgaacatcattatctccatattcagactggacaagtacagaccaaag
acagaaccaacgcacacagatttcacctttgaaacgcacatctactttgacgacgccttc
atacatgtcgaagggagtgaaggccatcacctcaacacatatggagaggaccttttggaa
atcctagcagaagtttatggcatcttcacgaacatcgacgaaaagtacttcgtaaagaag
cagcacatccccgatcagaagatcatccggacgccgtacggaggtcgcctggtgatcacc
atgccccacgggaacgtcatcatagttcacttcaaggacaagacgctcatccgtcacaag
aagagatggtctcaggtcatgtacctttactatcttcttggctggaaactcatgggcaaa
cattacgcacgctgggcgaagggagcggacgaggctgagctgaaagcggcagttcaaaaa
gagaagcacaacacctacatcctggctttggacggcgacaccgacttccaacccgcttcc
gtcatgctgctcatcgatcggttgaaaatgtaccctcatgtcggggcggcgtgcggcagg
attcacccgaccggagcaggtcccgcggtatggttccagaagtttgaatacgccgtcagc
cattggctgcagaagacagcggagcacgtgattggctgcgtgctctgcagccccggctgc
ttcagtctgttcagagcggaggcgctgatggacgacaacgtgatgaagaaatactccacc
aagtccacggaggcgagccactacatccagtacgaccaaggcgaggaccgctggctgtgc
actctgctgctgaagcagggatggagggtggagtacaacgcggcatctgatgcctacacc
agcgcaccagaggacttcaaagaactctacaaccagcgtcgtcgatggggtccgtccaca
atggccaacgtggtggatctgctcggctccaccagcatcgtgtccaagaggaacccgtcc
atgtccaagccgttcatgttctaccagctcttcggcatcatctcggcggttctggcccct
gccacaatctgcctgttgattgcaggtagtttgaccttcatcgtgacactcgacaacaac
agtgccctggtcctgtctgtgatacctccggccatctaccttgtgatttgcttcaatgtc
aaatcgaacactcagatccagattgcagcgttcatgagtgtcatatatgcgttcctcatg
ctggtggtgtccatgactatcatcggcgcgatgatgaaggaccgaaccatcctgacaccc
agcagcatcttcgtcatcgcgatggccacgatttacatcatcaccgcgataatgcatccc
caggaatcccatctggtgttccacggctttctctacatcctctgcatcccgagtgcctac
ctcctgctcaccatctactccatggtcaacatgaacaacgtgtcctggggcacacgggag
accaaacccgccggcggagctgcgacgccagaacctgccgccaaggagacgaaaacccag
caagccaaaagctccttccaaaggttcttcgcgtggtgcaaatgctgtaaaaacagcaac
tacagagcgggaaccatgcaagcgtctgtcaaccaggacaacctgatcatagaggtggag
cagcctgaacgccagccccaaaacagcatcgtggacaatagtccccaagacgaagcgccg
caagcagagccggttttaccccaccctagccaatgtttcgtcacacaactgcagagcaag
tccactgatatgcagctggtggaggaatcgctcgacgaggaggagaataagttcttcata
gatcttcagaagaagtacttggagcctctgaaggacgacaaggagagacagaaaaagatc
accaatgagctgcgagagctgaggaacaaggtcaactttgccttcttcatcacgaattgc
atctggctggtggcgacgttcaccctgcagctcttcgacgcctccttctccataagggtg
cccaagctcgacgtcaacctccaggacaccggagaagacgttcaaatcgatcccatcggc
ttcatgttcatcctgggattcgcgacttcggtcaccatccagttcctcacgatgttctac
cacaggatcaacactctgatccattacgtggcctttttggacacggagggcacagactat
aagattcaacccgttgaaacctacaagccacccaaaaaggtttccaagaagatgtccgaa
ttcgactccatctccgataccaagtccaacttcagcgtcgccacgaccgccgacgaagac
ttcgacgacgaatccgacttcgaggaggagagcgatgacgagttctacgaagacatcccg
gggacttcgctgtaa
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