Pseudoliparis swirei (Mariana hadal snailfish): 130201729
Help
Entry
130201729 CDS
T09868
Name
(RefSeq) sorting nexin-4-like isoform X1
KO
K17919
sorting nexin-4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130201729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201729
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130201729
Membrane trafficking [BR:
pswi04131
]
SNARE
SNARE associated proteins
Others
130201729
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
130201729
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
130201729
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130201729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
130201729
NCBI-ProteinID:
XP_056282808
LinkDB
All DBs
Position
2:complement(12499175..12531638)
Genome browser
AA seq
436 aa
AA seq
DB search
MADCGSNEEVAVIFNTDITSTESENNLINTMVEREATLLRKMEINVTEAEKRTGKNTVNM
QETYTVYLIETRSAETVPEGGTPATPDSLWRRYSEFELLRTYLLVTYPYIIIPPLPEKRA
EFVWHKMSADNLDPDFVERRRVGLENFLLRVASHPVLYNDKIFFLFLTEEKEWREVVLET
GFQDKVDSRLKSLSAMFRVKNPDERFTELKHYSDELNSVISQLLRVRAKVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTFAASIDDILEEEEHYADQLKEYLFYAEAV
RSVCRKHELLQYELEMVAQDLVSKKQQKEELATGTVRVFSLKGMTSKLFGQESQEQRESR
MAALEQSTREGEEALKEKNTECREFVRTAWKDIGRFKEQKDRDLREALISYAIMQVSMCK
KGIQVWSNAKECFNKM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagattgtggaagtaacgaagaagtggctgtgatctttaacaccgacatcacttca
acagaatccgagaacaacctcataaacacgatggtggaaagagaggcaactttgttgaga
aaaatggagataaatgtgactgaggcggagaagcgaacagggaagaacacggtgaacatg
caggaaacctacaccgtctacctcatagaaacacggtcagctgaaaccgttccagagggg
ggtactcccgcaacacctgactctttgtggagacgctacagtgagtttgagttgctcaga
acatacctcctggtcacctacccctacatcatcataccgccactaccagagaagagggca
gagtttgtgtggcacaaaatgtcggctgacaacctcgacccagactttgttgagcgacgg
agagtcggcctggaaaacttcctgcttcgtgttgcatcacatcctgtcctttacaatgac
aaaatcttcttcctctttctgacagaggagaaagaatggagggaggtggttttggagaca
ggcttccaagacaaggttgactccagactaaagtctctgagtgccatgttcagagtcaag
aaccctgacgagcgattcacagaactgaagcactacagtgatgaactgaactctgtcatt
tctcagttactgagggtgcgggcgaaagtagctgacagactgtatggagtttacaaggtc
catggtaactacggcagagtcttcagtgagtggagtgcgattgaaaaagagatgggggat
ggattgcagagtgcgggccaccacatggacacgtttgctgcatcgatagatgacattctg
gaggaagaggagcactatgctgaccaactgaaagaatacctcttctatgctgaagctgtc
aggtccgtgtgcaggaaacatgagctgctccagtatgaattggagatggtagctcaggac
ctcgtcagtaagaaacaacagaaagaagagctggctaccgggacagtgcgtgtcttttct
ctgaaggggatgaccagtaaactgttcggccaagagagccaagagcagagggagagcagg
atggccgccctggagcagagcacccgtgagggcgaggaagcgctcaaggaaaagaacaca
gagtgccgagagtttgtgcgaacggcttggaaagacatcggacgttttaaggaacagaag
gacagagatttgcgtgaagcactaattagctacgccatcatgcaggtcagcatgtgtaag
aagggaatccaggtgtggtccaatgccaaggagtgtttcaacaaaatgtga
DBGET
integrated database retrieval system
