Pseudoliparis swirei (Mariana hadal snailfish): 130201748
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Entry
130201748 CDS
T09868
Symbol
srp54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03060
Protein export
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
130201748 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswi02044
]
130201748 (srp54)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
130201748 (srp54)
Secretion system [BR:
pswi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
130201748 (srp54)
Eukaryotic Sec-SRP protein
130201748 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
nSTAND3
DUF2209
NPHP3_N
AAA_33
AAA_17
ResIII
SRPRB
AAA_22
MeaB
APS_kinase
MobB
AAA_30
AAA_19
Zeta_toxin
AAA
PduV-EutP
6PF2K
nSTAND_NTPase7
AAA_16
ATP_bind_1
Thymidylate_kin
AAA_18
AAA_31
Torsin
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
130201748
NCBI-ProteinID:
XP_056282826
LinkDB
All DBs
Position
11:complement(15179058..15183624)
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
GENFEIIIVDTSGRHKQEDTLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV
DIASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKLPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagccgacctcgggaggaagatcacctcggcgctgaggtcgctcagcaacgcc
accatcatcaatgaggaggtgttgaatgccatgctgaaggaggtgtgtgcggcccttctg
gaggctgacgtcaacatcaaactggtcaagcagctgagagagaatgtcaagtctgccata
gatctggaggagatggcgtcaggcctgaacaagaggaggatgattcaacatgccgtgttc
aaggagctcgtcaagctggtggacccaggtgtaaaggcctggactccgacaaaaggaaag
aacaacgtcatcatgtttgtcggtctgcagggtagtgggaaaactacaacctgctccaag
ctggcctattattaccaaaggaagggctggaagacctgcctgatctgtgccgacaccttc
agagctggtgccttcgatcagctgaaacagaacgccaccaaagccaggatcccgttctac
ggcagttacacagagatggacccggtggtgatcgctgccgagggagtcgagaagttcaaa
ggagagaactttgagattatcatcgtcgacacgagtggacgacacaaacaggaggataca
ctgtttgaggagatgctgcaagtctccaacgctgtgcaacctgacaacatcgtgtacgtg
atggatgcctccatcggccaggcctgtgagtctcaggcgaaggccttcaaagacaaagtg
gacatcgcctcggtgatcgtcaccaaactggacgggcacgccaaaggaggcggagctctg
agcgccgtggccgccaccaggagtcccatcatcttcatcgggaccggagaacacattgac
gacttcgagcccttcaagactcagcccttcatcagcaagcttctcgggatgggagacatc
gagggtttgattgaccgggtgaacgaactgaaactggacgacaacgaggagctgatcgac
aaactgaaacacggtcagttcaccctcagggacatgtacgagcagttccagaacatcatg
aagatgggccccttcggacagatcatggggatgattcctggcttcgggaccgacttcatg
agtaaaggaaacgagcaggagtccatggcccgcctgaagaaactgatgaccatcatggac
agcatgaacgaccaggagctggacagtaaggacggagccaagctgttcagcaagctgccc
aaccggatccagcgggtcgctcgggggtcgggtgtggccaccagggacgtccaggagctg
ctgacccagtacaccaagttcgcccagatggtgaagaagatggggggcatcaaaggcctc
ttcaaagggggagacatgtccaagaacgtcaacccgtctcagatggctaagctgaaccag
caaatggcgaagatgatggaccccagagtcctgcaccacatgggcgggatggccggcctt
cagtccatgatgcgtcagtttcagcaaggagccgcgggcaacatgaagggcatgatgggc
ttcaacaacatgtga
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