Pseudoliparis swirei (Mariana hadal snailfish): 130201752
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Entry
130201752 CDS
T09868
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130201752 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130201752 (capn3a)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
130201752 (capn3a)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130201752 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
130201752
NCBI-ProteinID:
XP_056282833
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All DBs
Position
11:21597741..21613456
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNGQDFNALRHECLQKKRRFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICESPQFVVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPLEQSFSESYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKETPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTATGLVKGHAYSLTAVEECKPSQHKDSKFRLVRLRNPWGQVE
WKGPWSDNSKEWATLSTAEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPGTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVSL
MQKNHRKERKLGANLFTIGFAIYEVPKEMHGNKQHVQKDFFLLNSSTARCKSYINLREVT
QRFCLSPGEYVIVPSTYEPHKEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASVGEES
EEDQQFRNIFQEIPGDDREITANELKDVLNRVLSKRMDLNTEGFSLESCRSMIALMDMDE
TGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYDMRNAVNDAGFRLNNQLYDIITM
RYADESMNIDFDSFISCLVRLEAMFRAFQAFDSDGDGTIRLSVMEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacacaccgtctggctttttctgtgaccggttgatccgggaaagagagcggcga
gacggggaagggtctctgaacaagccgctccgcttcaacggccaggacttcaacgcgctg
agacacgagtgcctccagaagaagaggcggtttgaggacgactcgttcccggccaccgtg
gagtccctgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatatgcgagagccctcagttcgtggtcggaggagccagtcggacg
gacatctgccagggagatctcggtgactgctggttgctggccgccatcgcctgtctcacc
ttgaatgagaagcttctctaccgtgtcgttcccctggagcaaagcttctccgagagctac
ggaggcatcttccacttccagttctggcgttacggcgactgggtcgacgtcgtcattgac
gaccgcatcccgaccttcaacaaccagctggtcttcaccaagtccgctgagaggaacgag
ttctggagcgcgctgctggagaaggcctacgccaagctgcacggctcctacgaggccctg
aagggagggaacaccaccgaggccatggaggatttcaccggtggagtcacagagttctac
gagatgaaggaaactcccaaagagctctacaagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccatcgattctctggttcccgctcgctttgagactcgtactgcg
acgggactcgtgaagggtcacgcctactccttgacggcggtggaggagtgcaaaccgtct
cagcacaaggactccaaattccgtctggtgcgtctcaggaacccgtggggtcaagtggag
tggaaaggtccctggagtgacaactcgaaggagtgggccacgctctctacggcggagaaa
gagaagctgcagcaccagagtgccgaggatggagagttctggatgtcattcgaggacttc
aagaagaactacaccaagatcgagatctgtaacctcacgcccgacgccctggaggacgac
aagattcacaagtggacggtttctgtgaacgagggtcgctgggtgagaggctgctcggcc
ggcggctgcaggaactacccaggcacgttctggaccaacccccagtaccgcctccgtctg
ctggaggaggacgacgaccccgaggacaacgaggtgggctgcaccttcgtcgtctcgctg
atgcagaagaaccaccggaaagagcgcaagttgggcgccaatctcttcaccatcggattc
gccatttacgaggtgccaaaggagatgcacgggaacaagcagcacgtgcagaaggacttc
ttcctgctcaactcctccacggctcgctgcaagtcgtacatcaacctgcgcgaggtcacc
cagcgcttctgcctgagccccggggagtacgtcatcgtgccctccacctacgagccgcac
aaggagggcgagttcatcctgcgggtgttctccgaaaagaggaacacctccgaggagata
gagaacaggatcgaggccgaccatcccgtgccggcgccggcctcagtgggggaggagagc
gaggaggaccagcagttcaggaatatttttcaggagatacctggagacgacagagaaatc
acagccaacgaactgaaagacgtcctcaaccgagtgctcagcaaacgtatggacctgaac
acagagggcttcagcctggagagctgcaggagcatgatagctctgatggacatggacgag
acaggtcgactcaacctgcaggagttcagacacctgtggaataagatcaagcagtggcag
ggaatctttaagcactataacgccgatcagtccggcagcatcaacagttacgacatgagg
aacgccgtcaacgatgcaggcttccgtctcaacaaccagctgtatgacatcatcaccatg
cgctacgccgacgagagcatgaacatcgactttgacagcttcatcagctgcctggtccgg
ctcgaagccatgttcagggcgttccaggccttcgattcggatggagatggtacgatcagg
ctcagtgtcatggagtggctccagttgaccatgtacgcctaa
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