Pseudoliparis swirei (Mariana hadal snailfish): 130201842
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Entry
130201842 CDS
T09868
Symbol
tnfsf13b
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130201842 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130201842 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130201842 (tnfsf13b)
04090 CD molecules [BR:
pswi04090
]
130201842 (tnfsf13b)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Tumor necrosis fators
130201842 (tnfsf13b)
CD molecules [BR:
pswi04090
]
Proteins
130201842 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
130201842
NCBI-ProteinID:
XP_056282978
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All DBs
Position
2:6803420..6805431
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AA seq
237 aa
AA seq
DB search
WWREAVLAGPPDFTSSSPSAVSPYQLVALGAEVEGLTSEVGSRREEGREARHAGQTENIR
RRSSREAVHQSGFQHAFPPIRRKRLVFGSEASGKSPCLQLLANNSRRTFQKEYNXWQAGL
RGGSALEADGGSMLVLEEGFYFVYSQLDPSRVDYTDSTFAMGHLIRRKRNVVGDEPXYVV
SFRCIQNMNPVHPYNTCYTGGVVKLEVGARLEPLTPRSPADVSLYGDTTYPGAVKPA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
tggtggagggaggctgtcctggccggtcctcctgacttcacctcctcctctccttcggcc
gtgtccccgtaccaactggtggccctcggggccgaggtggagggcctcacatccgaggtc
gggagcaggagagaagagggacgagaggctcggcatgcaggccagactgagaatatcagg
aggagaagcagccgagaggccgtgcaccaatctggctttcaacacgctttccctccgata
agaaggaaaaggttggtctttggatcagaggcatcaggtaagagcccttgcctgcagttg
ttggcaaacaatagcaggagaaccttccagaaagaatataacntctggcaggccgggctg
aggggaggctcggccctggaggcggacggaggcagcatgctggtcctggaggagggcttc
tacttcgtgtacagccagctagatccgagtcgggtcgactacacggacagcaccttcgct
atgggtcacctgatccgcaggaagaggaatgtggtgggagacgagcccnggtatgtggtc
tcgttccgctgcatccagaacatgaaccccgtccacccgtacaacacctgctacacggga
ggcgtcgtgaagctggaggtcggggcccgcttggagccgctgaccccacgctccccagcc
gacgtgtccctgtacggagacaccacctacccgggcgccgtcaagccggcttga
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