Pseudoliparis swirei (Mariana hadal snailfish): 130201908
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Entry
130201908 CDS
T09868
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130201908 (sptb)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130201908 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
130201908 (sptb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
DUF4600
Motif
Other DBs
NCBI-GeneID:
130201908
NCBI-ProteinID:
XP_056283079
LinkDB
All DBs
Position
11:18779781..18826617
Genome browser
AA seq
2508 aa
AA seq
DB search
MSSPCLLSAAPISQPRLREVKISLKAGSRETAATRSGGGGTKEASGGRPRAPAEKEAAAR
VGASRSRSMPPVHRAQRAEGRKAARGGGGGGSRKQQEPERHAENNGALLHIPLAAGPSPL
SSSSSSSSSGTPRRQRPAKPPTAPLLSSSSSSTTTSSSSAKSMKRARWLSFSTSNICFNT
ILDGRFRQLQDEREAVQQKTFTKWVNSILSRVGCRISNLYLDLRDGRMLIKLLEALAGER
LPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLILGLIWTMILRFQI
QDIVVETGQADQKETRSAKDALLLWCQMKTAGYPNVNIRNFTTSWKDGMAFNALIHRHRP
DLVDFGNLKGSNPTHNLQSAFNVAEQQLDVTKLLDPEDVFTENPDEKSIITYVVAFYHYF
SKMKQLAVEGKRVGKVLDHAIETEEMIAKYETLASDLLPWIEQTIVVLNNQKLANSLTGV
QQQLQAFNTYRTAEKPPKFQEKGNLEVLLFTILSRMRANNQRVYTPKEGALVADINKAWG
RLERAEHVRERVLRDELIRQEKLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAV
EAAKKKHDAIETDIDAYEERVQVLVGISGELEAERYHDAKRIDARKDNMLRLWDYLQELL
RARGARLDKNLTLQRIFQEMLHIISWMDDMKAQLLAPDFGKHLLEVEDLLQKHALLENDI
ALQADRVQGASAAALQFANGDSYKPCDPQVIRDRVQHLDLCYQELCALAAERRARLEQSR
LFWNFLWEVTELESWIREKEHIFSSLDYGKDLTSVLLLQSKHSAFEDELWARRANLDQVL
AEGDRMIRADHFGSAKVGECTDDIAGQWRQLEELAGFRKQNLRDTQRFYQFQGDADDLKA
WLLDAKRQMGADDTGHDEYTTQRLLKRHRDLRNEAMKNGATIGALSKQAGGLPEELQNTP
DIQRRLNDVKDLFLELISLADLRQKRLDDAMALYTIFSETDACELWMGQKETWLVGLEVP
EKLEDLEVVQNRLSILAQDMANVQSRVDDINKAVKQLEDSRHPCTREVKECQLRLNKRWE
AFKATVEDKKRRVDSAVSLNNYGLECDETASWVRDKTRVIESTQDLGNDLAAVMTIQRKL
CGMERDLAAIENKLAFLSAEADRLAADHPEDAADILARRGDLDAAWDALKKTLKDREDSL
GEVSKLQTFLQDMDDFQSWLFKSQKAVASEETPASLPEVEEQLGLHDAVREDIKNHEEDY
RLVRDTGAKVTQGQEEDPQYQQLEQRLKGLDRGWAELQKMWDSRKDFLDQGLGFQQFMRD
GKAVEAILNNQEYTLAHVDEADTLAGAEKALKKHEDFASTMEANEDKIDGALRGGRRLVD
GGNLYAGKVEDKMTSVRDRHNRNKRRAREVSEKLRDNSDLQHFLQNTQDLTVWINEKMLT
AQDTSYDEARNLHSKWLKHQAFMAELASNKDWLSNVDQEGHDLVEFKPELEPVVRERLAA
LHALWDELESTTQEKARLLFDANRSELFDQSLADMKAWLGGLRQQLQGGDQDVRDLTKAN
ILLKKHQMTENQVRDRARELEELQEAVTRHSGGREEQPELEAEQRALQRDFQQLLTPLAR
RRGQLEASRAVHQFYRDLADELLWIEERIPLATSQEHGHNLQTVQMLLKKNQTLQREIEG
HQPRVDEVQERGRRMAAAAAAGAEEGSTPEAELIADQLRELEEAWARLRNEMAERRERLS
GADSAQHYYNDADEAEAWIGEQELYMIAEDKAKDEQSAILMLKHHTGLKQAVDDFAGSIR
RLADRAQQMFGGEHPDGEEVIRRQGQVEKQYAGLRELAEDRGMKLDHTYHHFLLSREVEE
LEHWIAERDTVASSQEMGQDLDHVTLLRDKFREFARETGMLGQERVDLVNGTVDELIEAG
HAEAAAMAEWKDAINENWADLLELIDTRAQLLTTSYELLRYFDDGKELVAQIHDKQKELP
DDVGEDFSKAESFHRMHAAFERDISALGKQVQQFQETAARLHAQYAGGRADAIQEKEREV
VEAWRGLLDACDGRRAQLEDTAEKFRFFALVRDLMAWMESTIQQIETQEKPRDVSSVELL
QKYHQGIHSEIEARGATFTDCLDLGAALLTRRHRDSAEIKEKLVQLTEKRKEMMFKWDDR
WDWLRLLLEVCQFARDASVAEAWLIAQEPHVSSRDVGHTMDEVEKLLKRHEAFEKSTATW
EERFSALERLTTLELLELRTRQQEMEQFIKEELQSDMDSRREDTGFVEESSQLCTIEEQT
LSGSGPVEPSSALLKETAGDSTVPLESEMRESGSLELEPSFSAVTPREPERAATMPTETL
RAQAVLQEGVVGRKHDVEGSGKKASNRSWNSLYCVLKPGQLSAYKDAKSFGHGTTFHGED
PLTLRHATWELLANYKKKKHVAKLRLRDGSEYLFQCKDEEELQRWSQAVEKAVQPLAEEE
EEEASGPSGAKAHSLPPPPPSSSSTALPEPGAAKKDEKKKFSRFAKKK
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgtgcctgctgagcgcggcccccatcagccaaccccggctccgagaggtt
aagatcagcctgaaggccggcagcagggagaccgccgccacccggagcggcggcggcggg
accaaggaggcgtcgggcggccgcccccgcgcccccgcggagaaagaggccgccgctcgg
gtcggcgcgagccggagcaggagcatgccgccggtccaccgggcccagagagccgaaggc
aggaaggcggcgaggggtggcggcggcggtggcagcaggaagcagcaggagcctgaacgc
cacgcggagaacaacggcgctctcctgcacatcccgctcgccgcgggaccctccccgctg
tcgtcgtcctcctcctcgtcctcctccggcacccctagacgtcagcggcccgctaaacct
cccaccgcccccctcctctcctcctcttcctcctccaccaccacctcctcctcctcagct
aaaagtatgaagcgggcacgctggctgagcttcagcacctccaacatctgtttcaacacc
atcctggatggacgcttcaggcagctgcaagatgagcgcgaggctgttcagcagaagaca
ttcaccaagtgggtcaactccatcctgtcccgggtcggctgccgcatctccaacctctac
ctggacctgcgggacgggcgcatgctcatcaaactgctggaggcgctggccggcgagcga
cttccgaaacccaccaaaggccgaatgcgcatccactgtttggagaacgtggacaaggct
ctgcagttcctcaaagagcagagggtccacctggagaacatgggctcccacgacatcgtg
gacggcaaccatcgcctcatcctcggcctcatctggaccatgatccttcgcttccagatc
caggacatcgtcgtggaaacgggccaggcggaccagaaggagacgcgctcagccaaggac
gctcttcttctgtggtgtcagatgaaaacggcagggtatcccaacgtcaacatcagaaac
ttcaccactagctggaaagacggcatggccttcaacgctctcatacacagacaccggcca
gatttggtggactttggcaacctgaaggggtcaaacccgacccacaacctccagagcgcc
ttcaatgtagccgagcagcagctcgacgtcaccaagctgttggaccccgaagatgtgttc
acagagaacccggacgagaagtccatcatcacgtacgtggtggcattctaccactacttc
tccaagatgaagcagctcgccgtcgagggcaagagagtcggaaaggttctggatcacgcc
atcgagacagaggagatgatcgctaagtacgagacgctggcgtcggacctgctgccgtgg
atcgagcagaccatcgtcgtgctgaacaaccagaagctcgccaactcgctgacgggagtc
cagcagcagcttcaggccttcaacacgtaccgcacggcggagaagccgcccaagttccag
gagaaggggaacctggaggttctgctcttcaccatcctgagccgcatgcgggccaacaac
cagagggtctacacgcccaaagagggagccctggtcgcagacatcaacaaagcctggggc
cgcctggagagggcggagcacgtgcgggagcgagtcctgagggatgagctgatccggcag
gagaagctggagcagatggccaggaggttcgacaggaaggcggccatgagggagacctgg
ctgctggagaaccagaggctggtggcgcaggataactttggttacgacctgccggcggtg
gaggcggcgaagaagaagcacgacgccatcgagacggacatcgacgcctacgaggaacgc
gtccaggtgctggtgggcatctccggggagttggaggccgagcgctaccacgacgccaag
cgcatcgacgcgcgcaaggacaacatgcttcgcctgtgggactacctgcaggagctgctg
agggcccgcggggcgcggctggacaagaacctgaccctgcagaggatcttccaggagatg
ctgcacatcatcagctggatggacgacatgaaggctcaactcctggctcctgacttcggg
aagcacctgttggaagttgaagacttgttgcagaagcacgctctgctggagaacgacatc
gccctgcaggcggacagagtgcagggcgccagcgccgccgcgctccagttcgccaacgga
gacagctacaagccgtgtgatcctcaggtgatccgggaccgagtgcagcacctggacctg
tgctaccaggagctctgtgccctggcggccgagcggagagctcgcctggagcagtctcgt
ctcttctggaacttcctgtgggaggtgacggagctggagagctggatcagagagaaggag
cacatcttctcctccctggactacggcaaggacctgacgagcgtcctgctgctccagagc
aagcacagcgccttcgaggatgagctgtgggcccgccgtgccaacctggaccaggtgctg
gccgaaggggaccggatgatccgggccgatcacttcggctccgcgaaggtcggagaatgc
acggacgacatcgccggccagtggcggcagctggaggagctggccggcttccggaaacag
aacctgcgcgacacacagaggttctaccagttccagggcgatgccgacgatctcaaggcc
tggctgctggacgccaagaggcagatgggcgccgacgacacgggccacgacgagtacacc
acccagcggctgctgaagaggcaccgggacctgaggaacgaggcgatgaagaacggcgcc
accatcggcgccctgtccaaacaggccggcgggctgccagaggagctgcagaacaccccc
gatatccagaggcgcctgaacgacgtcaaggacctgttcctggagctcatctcgctggct
gacctgcggcagaagaggctcgatgacgctatggcgctctacaccatcttcagtgagacg
gacgcctgcgagctgtggatgggccagaaggagacgtggttggtgggtctagaggtgccc
gagaagctggaggacctggaagtggtacagaataggttgagcattctagctcaagacatg
gcgaatgttcagtcgagggttgatgacatcaacaaagccgtgaagcagctggaggacagc
agacacccttgcaccagagaggtcaaagagtgtcagctgcgactgaataagaggtgggag
gccttcaaggccacggtggaggacaagaagaggagagtggattccgccgtcagcctgaac
aattacgggctggagtgcgacgagaccgcgtcgtgggtcagggacaagacgcgggtcatc
gagtccacgcaggacctgggcaacgacctggcggccgtcatgaccatccagaggaagctg
tgcggcatggagagagatctggccgccatcgagaacaagctggccttcctgagcgcggag
gccgatcggctggccgcggaccacccggaggacgcggcggacatcttggcccgccgaggg
gatctggacgcggcgtgggacgcgctgaagaagaccctgaaggaccgagaggactctctg
ggcgaggtcagcaagctgcagacgttcctccaggacatggacgacttccagtcgtggctt
ttcaagagccagaaggccgtggcgtcggaggagacgcccgcctccttgccggaggtcgag
gagcagctcggcctccacgacgcggtgcgcgaagacatcaagaaccacgaggaggactat
cgcctcgtgagggacacgggggcaaaggtcacgcagggccaggaggaggatcctcagtac
cagcagctggagcagaggctgaaggggctggaccgcggctgggctgagctgcagaagatg
tgggacagccgcaaggacttcctggaccagggtctgggcttccagcagttcatgagggac
gggaaagcggtggaggccatcctcaacaaccaggagtacaccctggcccacgtggacgag
gcggacaccttggccggggcagagaaagctctgaagaagcacgaggactttgcgagcacc
atggaggccaacgaggacaagatcgacggcgccctgcgaggcgggcggcgcctggtggac
ggcggcaacctctacgccgggaaggtggaggacaagatgacctcggtccgagacaggcac
aaccggaataagaggagagctcgggaggtgtcggaaaagctgcgagacaacagcgacctg
cagcacttcctgcagaacacgcaggatctgaccgtgtggatcaacgagaagatgctgacg
gctcaggacacatcgtacgacgaggccaggaacctccacagcaagtggctgaagcaccag
gccttcatggccgagctggcctccaacaaggactggctgagcaacgtggaccaggagggt
cacgacctcgtggagttcaagcccgagctggagcccgtggtgagggagcgtctggccgcc
ctccacgcgctgtgggacgagctggagtccaccacgcaggagaaagcccggctgctgttc
gacgccaaccgctcggagctgttcgaccagagcctggccgacatgaaggcgtggctgggg
gggctgcggcagcagctgcagggcggcgaccaggacgtcagggacctgacgaaggccaac
atcctgctgaagaagcatcagatgacggagaaccaggtgcgtgaccgggcgcgggagctg
gaggagctgcaggaggccgtcacgaggcacagcggaggccgggaggagcagccggagctg
gaggccgagcagcgggccctgcagagggacttccagcagctgctcacgccgctggctcgg
cgccggggtcagctggaggccagcagggccgtgcaccagttctacagagacctggccgac
gagctgctctggattgaggagaggattcctctggcaacgtctcaagagcacggccacaat
cttcaaacggtgcagatgctgctgaagaagaatcagacgctgcagagggagatcgagggc
caccagcctcgcgtcgacgaagtgcaagagcgagggaggaggatggcggcggcggcggcg
gccggtgcggaggagggcagcacgccggaggcggagctaattgccgaccagctgcgggag
ctggaggaggcgtgggcccggctgcggaacgagatggccgagcgccgggagaggctgagc
ggcgccgactcggcgcagcactactacaacgacgccgatgaggccgaggcctggatcggg
gagcaggagctgtacatgatcgccgaggacaaggccaaggacgagcagagtgcgatactg
atgctgaagcaccacacgggcctgaagcaagccgtggacgacttcgccggctccatccgg
aggctggccgaccgcgcccaacagatgttcggcggcgagcaccccgatggcgaggaggtc
atcaggcgccagggccaggtggagaagcagtacgcggggctgagggagctggcggaggac
cgcgggatgaagctggaccacacctaccaccacttcctgctgagccgcgaggtggaggag
ctggaacactggatcgcagagagggacacggtggcctcgtcccaggagatgggccaggac
ctggaccacgtcacgctcctgagggacaagttccgcgagttcgcccgtgagacggggatg
ttgggccaggagcgcgtggacctggtcaacgggaccgtggacgagctgatcgaagcgggc
cacgccgaggcggccgccatggccgagtggaaggacgccatcaacgagaactgggccgac
ctgctggagctcatcgacacgcgcgcccagctgctcaccacctcctacgagctgctccgg
tactttgacgacgggaaggagctggtggctcagatccacgacaagcagaaggagctgccc
gacgacgtgggcgaggacttcagcaaagccgagtcgttccacaggatgcacgccgccttc
gagagagacatcagcgctctgggaaaacaggtccaacagttccaggagaccgccgcccgg
ctccacgcccagtacgcagggggccgagcggacgccatccaggagaaggagcgcgaggtg
gtggaggcgtggcggggcctgctggacgcctgcgacggccgccgggcgcagctggaggac
acggcggagaagttccgcttcttcgccttggtgcgagacctgatggcctggatggagagc
accatccagcagatagagacccaggagaaaccaagggacgtctcatcggtggagctgctg
cagaagtaccaccaggggatccactccgagatcgaggcccggggagcgaccttcactgac
tgcctggacctcggcgccgccctgctgacgcgccggcaccgagactctgctgagatcaaa
gagaagctggtgcagctgacggagaaaaggaaggagatgatgttcaagtgggacgacaga
tgggactggctgaggctcctgctggaggtgtgtcagtttgcgcgcgacgcctcggtggcg
gaggcgtggcttatcgcccaggagccgcacgtgtccagcagagacgtcggccacacgatg
gacgaggtggagaagctcctcaagaggcacgaggccttcgagaagtccaccgccacgtgg
gaggagcgcttctcggcgctggagcgcctcaccacgctggagctgttggagctgaggacc
cggcaacaggagatggagcagttcatcaaagaagagctgcagtcagatatggacagcagg
agagaagacacaggcttcgttgaagaatcttcgcagctctgcaccattgaggaacagaca
ctgtctggttctggaccggtggagcccagctccgccctgctgaaggagacggccggtgac
tccacggtgcccctggagtccgaaatgagggagagcggttctctggagctggaaccctcg
ttctcggcggtgaccccgagggaaccggagagggccgccaccatgcccacggagaccctc
agggcccaggccgtgctgcaggagggcgtggtgggccgcaagcacgacgtggagggttct
ggaaagaaggcttccaacaggtcgtggaacagcctgtactgcgtgctgaagcccggtcag
ctgtcggcgtacaaggacgccaagagcttcggccacgggacgacgttccacggcgaggac
ccgctgaccctccgccacgccacctgggagctcctcgccaactacaagaagaagaagcac
gtcgccaaactacggctccgagacggcagtgaatatctgttccagtgtaaagacgaggag
gagctccagcgttggagccaggccgtggagaaggccgtccaacccctggcggaggaggag
gaggaggaggcgtcggggccctcgggggccaaagcccacagcctgcccccccctcctccc
tcctcctcctccaccgcactgccggagcccggcgctgccaagaaagacgagaagaagaag
ttcagtcgctttgccaaaaagaagtga
DBGET
integrated database retrieval system
