Pseudoliparis swirei (Mariana hadal snailfish): 130201926
Help
Entry
130201926 CDS
T09868
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130201926 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
Tubby family proteins
130201926 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Hamartin
Motif
Other DBs
NCBI-GeneID:
130201926
NCBI-ProteinID:
XP_056283114
LinkDB
All DBs
Position
11:17930390..17946237
Genome browser
AA seq
1824 aa
AA seq
DB search
MSRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QISCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDST
ESDADSDDNVLPLVRRVKPLLTVTFLSGDISLMSNYDDLSPAVIRSGLKDVEAQWCSQGD
LLAVAGMERHGPPVDSACSSFTRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRL
FLACGPALYVVRVEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIK
PPIPDPNNIRDFVSYPTAGNERLHCTMKRAEDSPETGGPCYTLYLEYLGGLVPILKGRRI
SKLRPEFVIMDPKMDSKADEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
STRMNLESRKSPKLLRVNQEGQRSPRLPTKKPPVRSPSLTRREFSMDGITEHNYLAQVTS
NIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNTN
VFSEDEDDLPVMGPSGVAGDNPSCTVNIPIAPIHSAAQAMSPTQSIGLVQSLLANQNIHL
DVLTNPTSTAVAAAAASVPVPDHGQDAVPSPYPVPARYANPGQVIFNGLEMGPLLPGTLP
PPPPPHHLPPQRPHSQQPRQLPSKQSQQMQTQKQQKMHHHQQQQQHHHQSQAQQQQLQQQ
QQQIQQQQLQQQQLQQQHQQLQQQQQQLQQLQTLHQQQQQQHQQHQVQQHQQLQQNPTHQ
QLHHQQQIQQQQQQMQLQHEQMQQQQQQMQQQQQQIRQQIQEMRQQQQQLQQQHQQIQQQ
HQQMQRQHQQMQQQLKMQMMLPPPPSGYPTISLHQIHLLPPPPTTEPGFRGEHAHTLKPS
LPRTLPPFIEMDGAMEIQMRKVNPPPPYPGTAASAATLTAVATAQTLVTNCDSPSVLSPD
PCPKKEELSLHPASLQYPTPLGYERITTFDSSGNVEEVCRPRRRLVRNQNSYAVHGIGGS
ATLKVTSSENKKIQLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQATATLPPPQRVDSS
LIHATLRRDRRDVALKAPQMMESSRTLPTKAKMNSALALAYQQRVPTALYTCTQCSSHSS
GTSVSVGGGGTTSSGIAGGTVVRQDFPPGKGTHHSTIIVHSKSTSPMASQSSYSLLSAVD
NSRDRTVYVNSAFSEDETLSQQCHLEKAVRQLTLCDVSLTVKRPPPYQWDTSTTEEFWLT
PEQTMLGPHPPGAHKPPALILSQAQHLDMTRLPFVLTTKPPTSQTTGTLTFPSGYQISLS
PFPPSVGHCGPQLQTLQNPPPSEGVGSAPFSQQEPNVVLPPGYPPSLANLACCPLPPMYP
GASSCAGLQLHPVSLHPWNPYPCPPPMQDPPAPPLPTKTHQILEKPILSPPPPSGPPPPP
PLPPPPPPTELPPPPPSKSSSEEPAESANNFPEPSSLHDSPAAPQEAERFNKKSRKRLDS
RAEEANMTAVSEGKSRKEGRALSDFNTLISSPRLGSREKKKQPKGQREQPNKAKKMSRTT
NEFQDSSESEPELFISGDELMNQNQSGKKSWKNKRSMRMASELEEIKCRKANEREDRSLG
SQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNGYIL
DFQYPFSAVQAFAVALANVTQRLK
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcccggccactcagtagggatgctggccgccgtggaacacggc
cccatcctctgcagcgactccaacatcctgtgcctgtcgtggaaaggccgggtgcccaag
agcgagaaggacaagcccgtgtgccggcggcggtactacgaggagggctggctggccacg
ggcaacgggaggggggttgtcggggtcacgtttacgtccagccactgcaggagggacagg
agcacgccgcagaggatcaactttaatctgcggggacacaacagcgaggttgtgctggtg
cgttggaatgaaccctttcagaagctcgccacctgcgacatggagggaggtatttttgtg
tggatccagtatgaaggacgatggtctgtggagctggtgaacgacagaggagcccaggtg
agtgacttcacctggtcacacgacggcactcaagctctcattgcgtaccgggacggcttc
gtgttggtgggctcggtcagcggccagaggcactggtcctcggagatcaacctggagagt
cagatcagctgcggcatctggacgcccgacgatcagcaggtcttgttcggtactgcggac
ggtcaggtgatcgtgatggactgtcacgggcgaatgctcgcccacgttctgctgcacgag
tccgatgggatcgtgagcatgtcctggaactgccccgacttcctggtggaggacagcacg
gagagcgacgccgactccgacgacaacgttctgcctctagtgcggagagtcaagcctttg
ttgacagtcaccttcttatcgggagatatcagcttaatgagtaactacgacgacctctcg
cccgccgtgatccgctcggggctgaaagatgttgaggcccagtggtgctcccagggagac
ctcctggccgtggccggcatggagagacacgggccgcccgtcgactccgcctgctcctcc
ttcaccaggaacgccctcgttaagttctacaacgtccagggagagcacatctacaccttg
gaaacgccggcgcagagacccatcaccaccatctgttggggtcacagagactcccgtctg
ttcctggcgtgtggaccagcgctgtacgtggtgcgcgtggagcaccgggtggccagcctg
cagctcttatgccagcagggcatcgccagcgccctgcgggaggagaaggacgtggggaag
ctgaacatgccctcgctgctctgctcctacgtcaccaccgctttcatacccaccatcaag
cccccgatcccggaccccaacaacatccgtgactttgtgagctatcccaccgccggcaac
gagaggctccactgcaccatgaagagggcggaggacagccccgagacgggcggaccctgc
tatactctgtacctggagtacttaggagggctggtgcccatcctcaaaggaaggcgcatc
agtaaattaaggcccgagttcgtcatcatggatccaaagatggacagcaaagcagacgag
gtgtgtgtcaaccccatgatctcgtacactgacagctgcaactgctccgactcaagcgac
atcgagttgagcgacgagtgggtcggcaagaagtcgccaaagttatcccgaggaaaccgg
tcgacaaggatgaacttggagtcgagaaaatcgcccaaactcttgcgcgtcaaccaggaa
ggccaacggtcaccacgcctaccgacgaagaagcctccggttcggtctcccagtctgacg
cgtcgagagttttctatggatgggatcaccgagcacaactacctcgctcaagtcacatcc
aacatttgggggacaaaattcaaaattgtcggacttgcttcttttctcccggccaacctc
ggtgcagtcatctataagacgagtctgcttcacctacaaccgagacagatgacaatctac
cttccagaagtgcgaaagatttcccatgacttcatgagccttcctgttttcaacaccaat
gtgttcagcgaggatgaggacgacctaccagtgatggggccgtctggagtggcaggagac
aatccttcctgtacggtcaacatccccatcgctcccatccacagcgcggctcaggcaatg
tctccaactcagagcatcggcctggttcagtctcttctggccaatcagaacattcatctg
gatgtcctgaccaacccgacatccaccgccgtagccgccgccgcagcctctgtccccgtt
ccggatcacgggcaggatgcggttccatcgccgtatccggtgccggctcgatacgccaac
cctggccaagtgatcttcaacgggctggagatgggtcctcttcttcccggcactcttcct
ccccctcctccgccccaccacctcccgccgcagcgcccccattcgcagcagcctcgccaa
ctgccgtccaagcagtcgcagcagatgcagacgcagaagcagcagaaaatgcatcaccac
caacagcagcagcagcaccatcatcagtcccaagcgcagcagcagcagttgcagcagcag
cagcagcaaatccagcagcagcagctgcagcagcagcagttgcagcagcagcaccaacag
ctgcagcagcagcagcagcagctgcagcagctgcagacgctgcaccagcagcagcagcag
cagcatcaacaacaccaggttcagcaacaccaacagctgcagcagaacccgacgcaccaa
cagctccaccaccagcagcagattcagcagcagcagcagcagatgcagcttcagcacgag
caaatgcagcagcagcagcagcagatgcagcagcagcagcagcagatccgccagcagatc
caggagatgaggcagcagcagcagcagctccagcagcagcaccaacagatccagcagcag
catcaacagatgcagaggcagcaccaacagatgcagcagcagctgaagatgcagatgatg
ctgccccctccgccgtccggttacccaaccatttcgttgcaccagatccacctcctgcct
ccccctcctacaactgagcccgggttcaggggggagcacgcgcacactctgaagcccagt
ctgccgcggactttacctcccttcatcgaaatggatggcgctatggagattcagatgcgg
aaggtgaatcctcctccgccgtacccgggcaccgcggcatctgcggcgacgttgacggcc
gtcgccacggcccaaactctcgtcacgaactgcgacagcccgagcgtcctgtcgccggac
ccgtgcccgaagaaggaggagctgtcacttcaccccgcctctttacagtacccgacacct
ctgggctacgaaaggatcacgaccttcgacagcagcggcaacgtggaggaggtttgccgg
ccgcgcaggcgcctcgtccgcaaccaaaactcgtacgccgtccacggcattggaggctcg
gccacgctcaaagtcacatcctccgagaataagaaaatccagcttccctacagctcggcg
acgttgagtcgtctctccgtcccgcgatactccataccgagcggagaccctcccccttac
cctgatccggccaatcaagcgactgctacgcttcctccgccccagagagtcgatagcagt
ctgattcacgccactctccgtcgtgaccgcagggacgtggcgctcaaagcgccgcagatg
atggaaagctcaagaaccctccccaccaaggcgaaaatgaacagtgcgctcgcactcgcc
taccagcagagggtgcccacggcgttgtacacgtgcacgcagtgcagcagccacagtagc
ggcaccagcgtcagcgttggcggcggcgggacgacaagcagcggcatcgcgggcggcacg
gtggtgaggcaggacttcccgccggggaaagggacgcatcacagcaccatcatcgtgcac
tccaagagcacatcgccaatggcgtcgcaatcgtcgtacagtctgctgagcgccgtggac
aacagcagggaccggacggtctacgtcaactcggcctttagcgaagacgagactttgagt
cagcagtgtcacctcgagaaggccgtacgccagctgaccctctgcgacgtcagtctgacg
gttaaacgccctccgccgtaccagtgggacacctccaccaccgaggagttctggctcacc
ccagaacaaacaatgctcggtcctcatccgccgggcgctcacaaaccgccagcgctcatc
cttagtcaagctcagcacttggacatgactcggctaccgttcgtcctcacgactaaacct
ccgaccagtcagaccacgggcactctgactttcccatctggttaccagatatctctctcg
cctttcccccccagtgttggtcactgtggtcctcaacttcagaccttacagaaccctccg
ccaagcgaaggagttggctcggcccctttctctcagcaggaacccaacgtggtcttgccc
ccagggtatcctccgagtctggccaacttagcctgctgccccctccctccgatgtaccca
ggagccagctcatgtgccggacttcagctgcaccccgtcagcctccatccctggaaccct
tacccctgcccaccccccatgcaagaccctccagcgcctcccctcccgaccaaaacccat
cagattttagagaagccgatcctctcgccgccccctccttccggaccgcccccaccgccg
cctctcccgcctcctcctccacccactgagctcccgccaccgccgccgtccaaaagttcc
tcggaggagccggcggagtcggccaacaacttcccggagccgtcgtctctgcacgacagc
cccgccgcgccgcaggaggcggagcgcttcaacaagaagagccgcaaaaggctggacagc
cgggccgaggaggccaacatgaccgccgtgtccgagggcaaatcgaggaaggaagggcgc
gcgctctccgacttcaacacgctcatctccagcccgcggctcggcagcagggagaagaag
aagcagcccaaggggcagcgagagcagcccaataaggccaagaagatgagcaggaccacc
aacgagttccaggacagctcggagagcgagccggagctgttcatcagcggcgacgaactc
atgaaccagaaccagagcggcaagaagagctggaagaacaagcgcagcatgcgcatggcg
agcgagctggaggagataaagtgccgcaaggccaacgagagagaggaccggagtttaggg
agccagggattcgtctacgtcatggccaacaagcagccgctgtggaacgaagccacgcag
gtctaccagctcgacttcggagggcgtgtcacacaggagtcggcgaagaactttcagatt
gagctggatggtcgacaggtgatgcagtttggccgaatcgatgggaatggctacatcctg
gatttccagtaccctttctccgctgtgcaggcgtttgctgttgccttagccaacgtgact
caacggctgaaatga
DBGET
integrated database retrieval system
