Pseudoliparis swirei (Mariana hadal snailfish): 130201969
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Entry
130201969 CDS
T09868
Symbol
six6a
Name
(RefSeq) homeobox protein SIX6a isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130201969 (six6a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
130201969 (six6a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
130201969
NCBI-ProteinID:
XP_056283183
LinkDB
All DBs
Position
11:complement(2258555..2261018)
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AA seq
245 aa
AA seq
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MFQLPILNFSPQQVAGVCETLEESGDVERLGRLLWSLPVAPAACEVLNKNESVLRARAVV
AFHTGNFRELYHILENHKFTKESHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSGGSVRSLADDDGTVDRLGNSSSPEASLSSKAAASAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagctgcccatcttgaatttcagcccccagcaggtcgccggggtctgcgagact
ctggaggagagcggggacgtggagcgcctcggccgcttgctctggtcgctgcccgtcgcg
ccggcggcctgcgaggtcctcaacaagaacgagtcggtgttgagggcccgggcagtcgtc
gccttccacaccggcaatttccgtgaactctaccacatcctggagaaccacaagttcacc
aaagagtcgcacacgaagctgcaggcgctgtggctggaggcgcactaccaggaggcggag
aagctgcggggccgcccgctggggcccgtggacaaatacagggtgcggaagaagttcccc
ctgcccagaaccatatgggatggagagcagaagacgcactgcttcaaggagaggacccgg
cacttgttaagagaatggtatttgcaggatccctacccgaaccccagtaaaaagagggag
cttgcacaggctacaggacttacacccacacaagtaggaaactggtttaaaaaccgcaga
caaagagatagagcagcggctgcgaagaacaggctccagcagcaggtcctgtccggcggc
tcggttcgctccctggcggacgatgacggcaccgtggaccgcctggggaactcctccagc
ccggaggccagtctgtccagcaaagcagccgcctcggccatctccatcacctccagcgac
agtgaatgtgacatctga
DBGET
integrated database retrieval system
