Pseudoliparis swirei (Mariana hadal snailfish): 130202000
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Entry
130202000 CDS
T09868
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130202000
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRRNT
DUF6338
Motif
Other DBs
NCBI-GeneID:
130202000
NCBI-ProteinID:
XP_056283230
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Position
11:complement(15754371..15773773)
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AA seq
921 aa
AA seq
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MQWVTLTVALGCVCLCRAARTPPTPTPPTASTHTPLADDSEEEADEPCFEPCTCEVKEGV
LHVHCDGRSFTNASQVSQSWVRPFKLNLQRNSLRRLYSNGFQHLGNAVSINLGNNALQDI
RLGAFHGLAKLRRLYLHENKLEVFRNDTFAGLEALEYLQADYNVIKRIDSGALRFLYKLR
VLILNDNLIPVLPAHLFRSVSLTHLDLRGNRLKSLTYAGTLEYVGRSLMELQLEENPWNC
GCEAVQLRRWLGQIPYTAVVGDVTCEYPFHLHGKDLREISRKELCPNLPDKELQAEGGPP
AGSLPQHVPANSKPNAHPGRARPTKPSSMVHGSRQNTHAASSTSSSSSSSSAERKDRERQ
PRPTKRPRPTRVSPNQNGQIVAGYQTRPPIPIICPVGCTCSLHITDLGLTVNCKENGFQN
ASQLAPRPLNGRKLYLSGNLIQRVYHTDFWNFSSLDLLHLGNNRISYLQEGAFTGLANLR
SLYLNGNNLERLSPHMFLGLHNLRYLYFEYNEIHQVDPGTLDSMPSLQLLFLNANLLRSL
PPGVFSGVHLARLNLRNNHLLQLPMEGVLEHLTGLVQVDLQQNPWECTCAAAPLKRWLQG
LSAVVVVGEVVCHAPGPTSRMDLRSLSMELLCPELEEEQEEAATSTAAAAATASATAVSL
SYPGVSGPAPPPPPGRDSIPLSVLVLSLLVLFVSAFFAAAALIAYAVRRRDKLPFRRQGE
VDLAGIQMECGIFAEQTHHHHQQHHHHHGLPETPPPPPAQHRHVYETISPPKGHDPAAAP
PPPHMCSNPIYKEDAAAERAWSLDACSAAISTVAGALGPLPGLRRGDAILCPTVIDSQGP
TPTVELVDCLFRLPAPEFRDLPDRYARPPPQYPHPQDGERDAGPNGGSGDGVQSEQVAGE
QRARLRTTPDYMEVLDRSYQF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcactctcacggtggccctggggtgtgtgtgtctgtgccgggcggcgcgc
accccccccaccccgaccccccccaccgcctccacgcacacccctctcgccgacgactcc
gaggaggaggcggacgagccctgcttcgagccgtgcacgtgtgaggtcaaagagggcgtg
ctgcacgtgcactgtgatgggcggagcttcaccaatgccagccaggtgtctcagtcgtgg
gtccgccctttcaaactcaaccttcagaggaactctctgaggcgtctctatagcaacggg
ttccagcaccttggcaacgccgtgtcgataaacctgggcaacaatgcgctgcaggacatc
aggttgggggccttccacgggctggccaagctgaggcgcctctacctccacgagaacaag
ctggaggtcttcaggaacgacaccttcgccggcctggaggccctggagtacctccaggcc
gactacaacgtgatcaagcggatcgacagcggcgccctgaggttcctctacaagctgcgg
gttctcatcctcaacgacaacctgatccccgtcctgcccgcccacctgttcaggtctgtg
tctctgactcatctggacctgcgggggaaccgcctgaagagcctgacgtacgccggcacc
ctggagtacgtgggccgctccctgatggagctgcagctggaggagaacccctggaactgc
ggctgcgaggcggtgcagctccggcggtggctgggtcagatcccctacacggccgtggtc
ggggacgtcacctgcgagtaccccttccatctgcacggcaaggacctgagggagatctcc
cgcaaggagctgtgccccaacctgccggataaagagctgcaggcggagggcggtccgccg
gcgggatcgctgcctcaacacgtgccggccaactccaaacccaacgcccacccggggcga
gcccggcccacgaagccctcctccatggtccacggctcccgccagaacacccacgccgcc
tcctccacgtcttcgtcctcctcctcgtcctcggccgaacgcaaagacagggagaggcag
ccgaggccgacgaagaggccccggcccaccagggtctcgcccaaccagaacggccagatc
gtggccggctaccagacgcgacccccgatccccatcatctgccccgtgggctgcacctgc
agcctgcacatcacggacctgggcctgaccgtcaactgcaaggagaacggcttccagaac
gcgtcccagctggcgccgcggcccctcaacggccgcaagctgtacctgagcgggaacctt
atccagagggtctaccacacggacttctggaacttctccagcctggacctgctgcacctg
gggaacaaccgcatctcgtacctgcaggagggggccttcacgggcctggccaacctgagg
agcctctacctgaacgggaacaacctggagaggctcagcccgcacatgttcctgggcctg
cacaatctcaggtacctctactttgagtacaacgagatccaccaggtggaccccgggacc
ttggactccatgccgtccctccagctgctgttcctcaacgccaatctgctgcgctcgctc
ccccccggcgtgttctccggagtccacctggctcgactcaacctgaggaacaaccacctg
ctgcagctgcccatggagggcgtgctggagcacctcacggggctggtgcaggtggacctg
cagcagaacccgtgggagtgtacctgcgcggcggcgccgctgaagcgctggctgcagggc
ctgagcgcggtggtggtggtgggggaggtggtctgccacgcgccgggccccaccagccgg
atggacctgcgctccctctccatggagctgctgtgccccgagctggaggaggagcaggag
gaggcggccacctccacggccgccgccgctgccacggcctctgccaccgccgtgtcgctc
agctaccccggcgtctctggccccgcccccccacccccgccggggagggactccatcccc
ctctcggtgctcgtgctcagcctcctggtgctgttcgtgtcggcgttcttcgcggcggcg
gcgctcatcgcctacgccgtgaggaggcgggacaagctgccgttccgccgccagggcgag
gtggacctggcgggcatccagatggagtgcggcatcttcgccgagcagacgcaccaccac
caccagcaacaccaccaccaccacggcctcccagagacgccgccccccccgccggcccaa
cacaggcacgtgtacgaaaccatctcgcccccgaaaggtcatgacccagccgcggccccg
cccccgccgcacatgtgcagcaacccgatctacaaagaggacgccgccgcagagagggcg
tggtctctggacgcgtgctcggcggccatcagcaccgtggcgggggcgttgggcccgctg
cccggcctccgccgcggggacgccattctgtgcccgacggtgatcgacagccagggcccc
acccccacggtggagctggtggactgcctcttcaggctcccggcgccagagttcagggac
ctgccggacaggtacgccaggccgccgccccaataccctcacccgcaggacggcgagcgg
gacgctgggcccaacggcggcagcggcgacggcgtgcagagcgagcaggtggcgggggag
cagagagccagactgaggaccacaccggactacatggaggtgctggaccgatcttaccag
ttttaa
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