Pseudoliparis swirei (Mariana hadal snailfish): 130202037
Help
Entry
130202037 CDS
T09868
Symbol
tonsl
Name
(RefSeq) tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202037 (tonsl)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130202037 (tonsl)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
130202037 (tonsl)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130202037 (tonsl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
TPR_12
Ank
Ank_5
Ank_4
Ank_3
TPR_1
TPR_2
LRR_4
TPR_8
TPR_7
RPN7
TPR_10
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
130202037
NCBI-ProteinID:
XP_056283298
LinkDB
All DBs
Position
11:complement(558756..570396)
Genome browser
AA seq
1437 aa
AA seq
DB search
MSSTREIKQLQKAKSKAQSSNNLGEEANICNQLGELLSRSGDYEAAIREHQQELSFSEVL
NDVIGRAVANRKIGECYAEMGNIEAALKHQRCHLDLARSVRDHAEEQRALATIGRTYLFC
YESDQSRNSLEHAEDAFRKSLAIVDDRLEGSVPEREIREMKARLFLNLGLVCDHLGEHKR
CSEFIRRSVFIAEKSNLLEDLYRANFNLGNIYFRHGQQSNAVRCLEQAKECARKIKDKFS
ESECFHCIGKVQLSLADFVAARRSLKKAVSLGSQQPQDRQAVKKAFKYADKGCKLEEDLG
EDQGKRVTSHQAVGLAEQLGDLYCKVGCYRKALDAYQAQLKGAEALGKPARELAVIHVSL
AATHTDLRQHSEAVEHYRQELALRQGSPAEECSTWLNIATAQEESGCAFEEMEGSYTAAS
HCAQKSGQTRLQRRGLRLWLAAQRRHGSSQIDDTEARLQELCAAEGWAPDASDGEDEEEE
EMDNSEPLDDSDVVLSDSDDDLEGYDKMVSGRRKTGRWNKRNEKGETTLHRACIDGNLKQ
VQYLVEQGHPVNPRDYCGWTPLHEACNHGHYDIVPVLLEHGANINDPGGPSCEGVTPLHD
ALSCGNFNVARLLVERGASVTQRNSKGDTAMDTLRQWQRTYSRELDSDAKQQCVATERLL
RKALAGGVPGAAAPAKAFDALQDSQLFDAEMSEPLLSSDGGRSSSQDRPRANRSSEVEAG
PASPKRWTGSGSAQRHKARGTEAAVLYGNNSSSSEGSDSECQVSPLRAVRPRHSFPAAPS
QNRETNPIPNSGRESLREAPAPSVFAREEYHSAIRGLGSAKSLLQGPAQPQFSSIPAVSS
SNKSALVPEEEYVADDWLEDDLGEMQPKKKRRLVVDQSGMRGEDGASTSRGQNSLLNSDS
AYRIPSSSSRSLPLKKNSILKPRQVKMTQMPGMVRLGRREVNRSHSPTVTDEEDMRPETP
PYPQIFMQPAAHCVVAAPLAGSLPPPIRMRVRVQEDVFLIPVPQSEAASCTVSWLCEQAA
QRYYQKCGLLPHLSLQKEGALLSPQDLLMAVLHTNEEVLAEVCSWDLPPLPERYKKACQS
LAVDENKRVTRLCEVQDGSSSVSVCGLSLAASSLNPLLRALKLQASLTELHISGNRLHDN
LLPELVATTITMPRLRLLDISANGITGDGLEKAVNALKGQSHPAFPCLEELDLSMNPLGD
SVSETLSCLLSCCPLLAKLSLQACGLTARFLQQHRLLLANALTGTGHLKSVCLSHNALGS
TGFELVLKTLPLRCLTHLDLSAVCRGPADYPALEHLTKILSQDECSLTHLSLAANGLTDS
SVATLARCLPSCPTLVSLNLSGNPSVTSAALHNILASLREACRPLTLLNLQGCEVSGPWD
SGGLDGLSELVKDLRLCSQGLNKLDRQALKQSWDTSRSRGHFIDRNSKCLLTAATSS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgagctccacacgggagattaaacagctgcagaaagcaaagagcaaagcgcagagcagc
aacaatttaggagaggaagcgaatatctgcaatcagctcggagagctgctgtccagaagt
ggtgattatgaggctgccattagggagcaccagcaggagttgtctttctctgaggtgcta
aacgatgtgattggacgagctgtggccaatcgtaagataggagaatgctacgcagagatg
ggaaacatcgaagccgctttgaaacaccagcgatgccacctggacttggctcgctctgtc
agagatcatgctgaggagcaaagggcactcgccacgattggtcgaacctacctcttctgt
tatgaatcggaccaatcgaggaacagtttggagcacgcagaggatgccttcaggaagagc
ctggccattgtagatgaccgccttgaagggtctgtgccggagcgagagattagagagatg
aaggcccgcctcttcctcaatcttggtctggtctgtgatcatctcggggagcacaaacgt
tgcagcgagttcatcagacgaagtgtctttattgcagagaagagtaatctgctggaggat
ctctaccgtgcaaattttaacctgggcaacatttacttccgtcacggtcagcagtctaac
gctgtgcgctgcctggaacaggccaaagagtgtgcaaggaagatcaaggacaagttcagt
gagagcgagtgcttccactgcatcggcaaggtgcagttgtctctggctgattttgtagca
gccaggcgctctctgaagaaagccgtctctctgggttcccagcagccacaggacaggcaa
gcagtgaagaaagcttttaaatatgcggataagggttgtaaattggaggaagacttgggg
gaggatcagggcaaaagagttacctcccatcaggccgtggggctggcagagcagctgggg
gacctttactgtaaggtcggctgttacagaaaagctctggatgcatatcaagctcagtta
aagggcgctgaagcgttggggaagcctgcaagggagctggctgtcatccatgtgtccctg
gctgcgacccacacagacctgaggcagcacagcgaggcagtggagcactacaggcaggag
ctggctttacgacagggcagcccggccgaggagtgtagtacttggctgaacatcgcgaca
gctcaggaggagagcggctgtgcctttgaggaaatggagggcagctacactgcagcctca
cactgcgctcagaagtctggccagaccagactgcagagacgcgggctgaggctctggctg
gcggcgcagagacgacacggctcatcgcagattgatgacactgaggcgaggctgcaggag
ctgtgtgctgctgagggctgggctccagatgcgagcgatggggaggacgaggaagaggag
gagatggacaacagtgaacctctggacgacagcgatgtcgttctctcagactccgatgat
gatttggaaggttatgacaagatggtatcaggaaggaggaagacgggaaggtggaacaag
aggaacgagaagggcgagacgactctgcacagagcttgtatcgacggaaacctgaagcag
gtccagtatctggtggaacagggtcacccagtgaacccaagagattattgtggctggact
cctcttcatgaggcctgcaaccacggtcactatgacattgtacctgtgcttctggagcac
ggcgcgaacattaatgatccaggtgggccctcgtgtgaaggagtgacgcctctacacgat
gccctctcgtgtggcaatttcaatgttgcaagactcttggtggagcgaggggcgtctgtg
acccaacgcaactctaagggtgacaccgccatggacaccctgcggcagtggcagaggacg
tacagcagagagttggacagtgacgccaagcagcagtgcgtcgctaccgagagactgctc
aggaaggcacttgcagggggagtgcccggtgctgcggccccggccaaggcgttcgatgcg
ctgcaggacagccagctgtttgatgctgagatgtccgagccgctgctgtcctctgacggg
ggccgctcctccagccaagaccggccccgggccaacaggagctcagaggtggaggcagga
cccgccagccccaaacggtggacgggcagcggctcagcgcagcggcacaaagccagagga
acagaggctgctgtcctgtacgggaataacagcagctcctcagagggcagcgactccgag
tgccaggtgagtcctctccgtgccgtccgccctcgacacagtttcccagcggccccgagt
caaaacagggagaccaacccgatccccaactccggtcgagaaagtctcagggaggcgccc
gcgccatctgtctttgcacgagaggagtaccacagtgccattcgaggcttaggcagcgcc
aaaagtcttctccagggtccggcacagcctcagttttccagcataccagctgtttcatcc
agcaacaaatccgctctggttcccgaggaggagtatgtggctgatgactggctggaggat
gatttgggggaaatgcagccaaagaagaagaggaggcttgtagtggatcagagtgggatg
agaggggaggacggtgcctcaacatcaagaggccaaaacagcctcttaaactctgactcg
gcctacagaattccttcgtcctccagcaggagtctccctctgaaaaagaacagcatcctg
aagcctcgacaggtcaaaatgactcagatgccagggatggtccggttgggcagacgagag
gtcaacaggtcacacagccctacagttacagacgaggaggacatgagacctgaaacgcca
ccatacccacaaatattcatgcagcctgcagctcattgtgttgttgctgctcctctggcg
ggatcactgcccccacccatcagaatgagggtcagagttcaggaagatgttttcctcatc
ccagttccgcaaagtgaggcggcctcctgcaccgtgtcctggctgtgtgagcaggccgcg
cagcgttattaccagaaatgtggccttctgcctcacctctccctgcagaaggaaggggct
ctgctctccccgcaggaccttctgatggctgtcctccacaccaatgaggaggttctggcc
gaggtttgctcctgggatcttcctcctctccctgagcgctataagaaagcctgtcaaagc
ctggcagtggatgagaacaagcgtgtcacccggctgtgtgaggtgcaggatgggagctcc
tctgtgtcggtgtgcggcctcagcctggcggcctcttccctcaacccgctccttcgtgcc
ctaaaactgcaggccagcctcaccgagctgcatatttccggcaaccgtctccatgacaac
cttcttcccgagctggttgccacgacaatcaccatgcctcggcttcggctgttggacatt
tctgccaatggcattacaggagacgggctggagaaggcggtgaatgctttaaagggacag
agtcatcctgcgtttccgtgcctggaggagcttgacctcagcatgaacccgctgggggac
agtgtgtccgagaccctgtcctgtctgctgtcctgctgccctctgttagccaagctgtct
ctgcaggcctgtggcctcaccgctcgcttcctccagcagcatcggctgctgctggccaac
gctctgacaggaaccggccacctgaaatcagtgtgtctatcccacaatgcactgggctcc
actggctttgagctcgtgttaaagacgctgcctcttcgctgtctcacacacctggacctg
tctgcagtctgcaggggtccggcagattacccggcgctggaacacctcaccaaaatcttg
tcgcaggatgagtgttcactgacccacctgagtctggcagcaaacgggttgacagacagc
agcgtagccaccttggccaggtgcctgccctcctgcccgactctggtgagtctgaacctc
tcaggaaatccatctgttacctcagcagcacttcacaacatcctggcctcactccgagag
gcttgtcgacctctgacccttctaaacctgcaaggttgtgaggtgtctggcccctgggac
agtggcggtctggatggtttgtcagagctggtcaaggatctccgtctttgctctcagggg
ctcaacaagctggaccggcaggccttgaagcagagctgggacacaagtcggtcccgcgga
cacttcattgaccgaaacagtaagtgtctgctcactgctgccacctcctcgtga
DBGET
integrated database retrieval system
