Pseudoliparis swirei (Mariana hadal snailfish): 130202120
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Entry
130202120 CDS
T09868
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130202120 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130202120 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130202120 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
DUF948
Motif
Other DBs
NCBI-GeneID:
130202120
NCBI-ProteinID:
XP_056283360
LinkDB
All DBs
Position
12:complement(15141336..15311665)
Genome browser
AA seq
3256 aa
AA seq
DB search
MKRLRLVLLTALLWQCSYARQRGLFPAVLNLASMADISSNATCGVLGPEMFCKLVEHVPG
LPVRNPQCRICNQRSTNPIEQHPIEYATDGTNRWWQSPSIKNGMMYHHVTITLDLKQVFQ
IAYMILKAANAPRPGNWVLEHSIDGVTFEPWQYYAITDTECLTRFNINPRTGTPSYTRDD
EVICTSYYSKIHPLENGEIHTSLINGRPSATDPSPTLLNFTSARYIRLVFQRIRTLNADL
MTLTLHDTKDMDPIVTRRYFYSIKDISIGGMCICYGHAKACPLNTATKRFSCECEHNTCG
QSCDRCCPGYNQQPWMAGTFLTRHICEKCNCHAKADECYFNQTVADLSLSLNIQGQNRGG
GVCIGCRDNTAGINCQTCIDGYYRPAGVSAEEEDPCIPCTCDSHGSISQSCVADSSKATP
IQPAGSCRCNEGFGGLRCDRCAVGYIGFPSCQRCNCSVEGSTNDDPCITPCVCKENVEGE
NCDRCKLGFYNLQGDNRRGCEKCSCMGVSSQCSASTWTYHNESTLTGWHLLGETGGRVWS
VHRQTPPYLSVRHSDVENDLGSAYYWNAPDLYLGNKLTAYGGSLVSSVSYTTDQQEQMAI
RVTSQPDLVIEGGGIKIIDRRFGQPVYPSSPSTNRIALLPENFVVSESAQAISRRDFLSV
LANVTRVMVRASYSTEPSAVYRLHSFSMQVANPSASGESIASAVENCSCPPGYAGTSCEA
CIPWFRRVNGDLYNGVCEACNCHGHTSQCHELTGHCLDCSHHTTGPHCDSCLPGYYGNAT
RGSPADCQPCACPLNLPSNNFSPTCHLDGEGELLCDRCQPGYTGPQCDRCSNGHFGRPAV
PGGSCEPCDCHGNLDLSAPGSCDPITGRCLRCRQGYGSASCGSCADGYHGDAIIAKNCQP
CQCHTNGSVSEVCNKETGRCHCRTNVVGRQCDECIPNCWWDAERQDCIPCRCSPHGSMSQ
RCDIEGRCICRPGFVGQHCDLRRQGYERRETRRPVKRVPIEVAQQRWGGSSRTGGCPRGA
YRPKTGSQTHGISTGGVCIPCHCNSFGSKSFDCDETGQCRCQPGVTTSKCDRCGRGFFNF
QEGGCTLCQCSHVGNNCDTTTGQCICPPNTIGERCDYCAPNHWGHDIITGCKACDCSVIG
SVTQQCNVNTGCCMCRDSFRGEKCKECRIGYRDFPQCTQCECNVSGSDSQTCDQERGVCA
CADRTGLCSCKANVEGDNCDRCKPDTFGLSVRNSLGCRNCYCYGLTRSCTEARGLIRIWL
ALKPEQTVLPLVDKSNTVETRRGVSFQHPEILAHTELVTSTLSEPYYWKLPEQFRGSMIT
AYGGQLKYAVYYEARDETGPSSYEPQVIINGGATRNILMTRSIPGLQMGQLTRHQIDMTE
HEWKYADGRSMTREDFMDILFYVDYILIKASHGNLMRHSRISEISLTVAEEGRPTKESEE
AHQIEKCECPVGYSGFSCEECAAGFYRLRAGSMTSASASRLPTAAGMGSCVQCQCSGHSS
TCDPETSICQKCQDNTEGDRCERCAPGFYGVVRGSHDDCKPCACPLTNPENNFSPTCVTE
RHDDYRCTSCPEGYEGKYCERCATGYHGNPQMPGGHCKECKCSFWGALPGPCDPVTGQCR
CRVGATGKPCDQCMDRHVCGAAGIISCDDECSGLLISDMDRLYRIITDVTLTTPLPPPYK
VLYRFENMTEELKHMLSPQKAPERLLQLADSNLGSLVVEMDQLHSRSTKVSADGEQVEDD
ADRIHKRAEDLEQFIRNTLLGAQDLQSKAADLNQTLSRRDGTPEKSLKQMKEEIQAMLAE
MRKRQLGGKKSIAEEEMDLAEELYQKVKRLFGDPHQATEDLKAEIKEKLSDHEGKLQDAQ
DLLHSAQGKTRQAGSLAEQNQANLTALERKRSAVSGVRQEAQEVLGEGEHLLDEANQLSD
NINKEIEDLEEMAGELGPLHDQLDDKVSHLTGGLGDGSLANHVHDAEEHAKQLNESAAIL
DGILAEAKNLSFNATAAFKAYSNIKANVDAAEKEAKAAKQRASEALALALDPEVPVKEAA
QVAHQKSHKLLNQAKQLQNDVKENADDVAGLKGRVKAARDKTKDLLKAVNGTMATLNAIP
NDTAAQLAATKAVAADANATAIDVLERLGDLNLQLYGLQRNHTELEDTVNAANQMIQDPE
KNIHAAGAKVKDLEDEADRLLEKLQPIKQLQDNLRRNISQIKELINQARKQANSIKVSVS
SGGDCLRSYRPDIRKGRYNTIILHVKTTTADNLLFYLGSAKYVDFLALEMRKGKVNFLWD
VGSGVGRVEYPHHTINDGNWHRIEASRNGLNGTISVYPLEGSMARMMPTPASANSPTAFT
ILDVDQNAYLFVGGIIGTVKKAEAVRTTTFTGCIGETFLDGKPIGLWNYRERQGDCKGCV
VSPQRQASEGTVQLDGEGYAAVGRPTRWNPNVSSVTLKFRTFSSESLLMYLATEDMKDFM
SLELSEGKVKVNFDLGSGVGSAVSANRHNDGRWKSLTMSRNKKQATVTVVDIDSGAEEKI
VTSSQGSAAGLNLRENQKIYFGGLPTIGNYRSEVTLKRYAGCLREIEISRTPYSLLSSSD
YTGVTKGCNVENLYTVSFSRPGYMELGGLSLAVGTEISLSFSTLADTGTIMLAVGGASPI
GQQVRNTNLLSSKRRRRQSGEPYLSVLLNKGSLEVLLFTGSHSLRRVIRRPEHGVLNDGM
EHSLRIERLPGRSLAVQVDEETKREAALPNDQPVSLQRIFLGGIPAAVEQTSNRANVPFQ
GCIWNLMVNAVLSDFSLPVSFENAEIGQCPNLAPPPHLPYLPEEEKEKEKEESKPFSPPL
IATTVTPAPGPPAEATPAARPAATPTAAAAPPTAKQEPSADLDSCASAVAPAALEEAYQF
GLTRNSHMRFAFDETKVRERLILEFELRTKEESGLVLYMARINHADFVTIQIKDRQVCLG
YDLGHGNISGCVPFSINDGNWHKIRVTRNKQRCLLMVDGRYSKQMISPKRADLLDVVGML
YLGGLPQNYTSKRIGPILYSINGCIRRFKMVGGAVSTKAAATGRSEAVVEDFKLNMATPT
SSHMIGRCFVATETGTYFEGTGYLKAVSSYRVGLDVSIAFEFRTSRTSGVLLAVSNQAKD
GLGLEIVEGKLLFHVDNGAGRITAAHTPEGEGFCDGRWHSVTAKKLRHRVELLVDDHQSQ
AESPNARSNTCDTNDPIYVGGYPDGVRQAALSTRTSFKGCLRNLKITKASKTMEVQFNKA
LEIKGVQPLSCPAAAA
NT seq
9771 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgactccggctcgtgctcctgaccgcgttgctatggcaatgcagctatgcccgg
cagagaggactgttcccggcagtgttgaacctggcgtccatggccgacatatcctctaat
gctacctgtggcgtcctgggcccagagatgttctgtaagctggtggaacatgtaccgggc
ctgcctgttagaaacccacagtgtcggatctgcaaccagaggagtacaaacccaatcgaa
caacatcccatagaatatgccacagatgggacgaaccgttggtggcaaagtccctccatc
aagaatggaatgatgtaccaccacgtgacgatcactctggacttgaagcaggttttccag
atcgcttatatgatcctcaaggcagccaacgcacctcggccaggtaattgggtcttagag
cattcaattgatggtgtgacctttgaaccctggcagtactacgccatcacagacacagag
tgcctgacgaggttcaacattaatccgcggactggaactccatcctacaccagagatgat
gaagttatctgcacatcttattattccaagattcatcctctggagaacggagagatccac
acgtctttgatcaacggccggcccagtgcaactgacccatccccgaccctgttgaacttc
acctccgcccgctacatcaggctggtgtttcagcgaatcagaacgctgaacgccgacctc
atgactctgacactccatgacacgaaggatatggatcccatcgtgacgagacggtacttc
tactctattaaggacatctcaatcggagggatgtgtatctgttatggccacgccaaagct
tgtccactcaacactgccacaaagaggtttagctgtgaatgtgaacacaacacatgcggg
cagagctgtgatcgctgttgccctggttacaaccagcagccctggatggcaggaaccttc
ctcactcgacatatctgcgagaagtgcaactgccacgctaaggccgacgagtgctacttt
aatcagaccgtggcagatctgtcactgagcctgaacatccaaggtcaaaacagaggaggt
ggagtttgtattggttgccgtgacaacacagctggaatcaactgtcagacatgcattgat
ggatactacagacctgctggggtgagcgctgaggaggaggacccctgcatcccctgtaca
tgtgactcgcatggttcgatcagccaatcatgtgtcgcagattcaagcaaggcgacgccc
attcagccagcagggtcatgccggtgtaacgagggttttgggggtctgcgatgtgacagg
tgtgctgttggttacatcggcttcccgtcctgccagcgctgtaactgcagtgtggaagga
agcaccaacgatgacccatgtataacaccctgcgtgtgcaaggaaaacgtggaaggagaa
aactgtgaccgctgtaaactggggttctataacctccaaggtgacaatcgccgtggctgc
gaaaagtgctcctgtatgggcgtgtccagtcagtgctctgcttccacatggacctatcac
aacgagagcactctgacaggctggcacttgcttggagaaacaggaggaagagtgtggtcc
gtccacaggcagacgcctccgtatctcagcgtccgacactcggacgttgagaatgatctt
ggctccgcctactactggaacgcacctgatctatacctgggaaacaagcttacagcctat
ggagggagtttggtctcctctgtttcttataccaccgaccaacaagagcagatggccata
agagtgacctcacaacccgacctggtcatcgagggaggtgggatcaagattattgacagg
cggtttggccagccggtgtacccgtcctcgccgagcaccaatcgcattgctctccttcca
gagaatttcgtggtttcagaaagcgcacaggcgattagccggagggacttcctgtctgtg
ttggccaatgtgaccagagtgatggtgcgggcctcttatagcacagaacccagcgctgtg
tacagactccactcattctcaatgcaggtagcgaatccctctgccagtggagagagcata
gcatcagctgtagagaactgctcttgtcctcctggatacgctggaacttcctgtgaggcc
tgtattccttggtttcggagggttaacggggatctgtacaatggtgtgtgtgaagcttgt
aattgccatggacacacatctcagtgccacgagctcacaggacactgcctggactgctcc
caccacaccacaggcccacactgtgactcctgcctacctggttattatggcaacgccacc
cgggggtcaccggcagactgtcagccctgcgcctgcccactcaatcttccaagtaacaat
ttcagccccacctgccacctcgatggagaaggggagctgctgtgcgaccggtgccagcct
ggatacacaggaccacaatgtgacagatgttccaacggacacttcggccggcccgccgtg
ccaggtggatcctgcgagccctgtgattgccacggcaacctggacctatccgcacctggc
agctgtgatccaatcacgggccggtgtctgcgctgtcgtcaaggttacggcagcgcgtct
tgcggcagttgtgctgacggttaccatggagatgccatcatcgcgaaaaactgccagccc
tgtcagtgccatacgaatggctctgtatctgaggtctgcaacaaggagactggacggtgc
cactgcagaacaaatgtggttggacgacagtgtgacgagtgcatccccaactgctggtgg
gatgctgagcggcaggattgtattccctgtcgctgcagcccccacggctctatgtctcag
cgctgtgacatcgagggccgctgcatctgtcgccccggctttgtgggccaacactgtgac
ctgcgtcgccaaggttacgagaggcgggaaacccggaggccggtgaagcgggttcccata
gaagtcgctcagcagagatggggggggtcctcccgcacggggggttgtcccaggggggca
tacaggcctaagacagggtcccagacccacggcattagcacgggtggagtgtgtatccca
tgccactgcaactcatttggttccaagtcattcgactgtgatgaaaccggtcagtgtcgg
tgtcagccgggcgtcactacatccaaatgtgaccggtgcggacgaggattcttcaacttc
caggagggcggctgcacactctgtcagtgcagtcacgtggggaataattgcgacactacc
acaggccagtgcatctgccctccaaacactatcggcgagaggtgcgactactgtgccccc
aaccactggggccatgacatcataactggatgcaaggcgtgtgactgcagtgtgatcggc
tcagtgacccagcagtgtaacgtcaacaccggctgctgcatgtgtcgcgactccttcaga
ggagagaaatgcaaggagtgtcgaattggatacagagactttcctcagtgcacccagtgc
gagtgtaacgtctccggatcggacagccagacctgcgaccaggagagaggagtgtgcgcc
tgcgcagatcgaactggactgtgtagctgcaaggcaaatgttgaaggagacaactgtgac
cgctgtaagcccgatacgtttgggttgtccgtacgaaactcgcttggctgcagaaactgt
tactgttacggactcacacgctcctgcacagaggcgcgaggactcatcaggatttggttg
gcgctgaagccggagcagacggtgctgcccctggtggataaatccaacactgtggagacg
aggagaggagtgagcttccagcacccggagatcctcgctcacacggagctggtcacctca
acgctctctgaaccctactactggaaactgccggagcagttcagaggctcaatgataaca
gcatatggtgggcagctgaaatatgcagtttactacgaggccagagatgaaactggtcct
tcgtcctatgagcctcaggtcatcattaacggcggtgccacccgcaacatactgatgacc
cgcagcatcccgggactccagatgggccagctcactcgccaccagatcgacatgacagag
catgagtggaagtacgcagatggcaggtccatgactcgagaggacttcatggatattttg
ttctatgtggactacatcctaattaaggcgtcacacggcaacttgatgaggcacagccgt
atttcagagatcagtctcacagtggcagaggaaggcagacccaccaaagagagcgaagaa
gcacatcagatcgagaagtgcgagtgtccagtcggatactctggattttcttgtgaggag
tgtgctgcaggtttctaccgtcttcgcgccggttccatgacatctgcttcagcgtccaga
ctgccaaccgctgccggcatgggcagctgtgttcagtgccaatgcagtgggcactcttcc
acctgtgaccctgagacatccatatgccagaagtgtcaagacaacaccgagggtgatcgg
tgtgaacgctgcgctccagggttctacggtgtggtccgaggttcccatgacgactgtaaa
ccgtgcgcctgtcccctcaccaacccagagaacaatttcagtccaacttgtgtaacggag
agacacgatgactaccgatgtacatcctgtcctgagggatatgagggcaaatactgtgag
aggtgtgctactggttaccatggtaacccacagatgccaggtggccactgcaaggagtgt
aagtgttccttttggggggcgctgcctggaccatgtgaccccgtcacaggccaatgccgt
tgcagggtcggggcaacggggaaaccgtgtgaccagtgcatggacaggcatgtgtgtgga
gccgctgggatcatctcgtgcgatgatgagtgctcgggtctgttgatcagcgatatggac
cgcctctatcgcataatcactgatgtcaccctgaccacaccccttccgccgccgtataaa
gtgttgtaccgcttcgagaacatgaccgaggaactcaagcacatgctgtcacctcagaaa
gctccggagagattactgcaactggccgactccaaccttggatctctggtcgtggagatg
gaccagctccacagcaggtccaccaaggtatctgctgacggagagcaggtggaggatgat
gctgacaggattcataaacgagctgaggacctggagcagttcatcaggaacacactgctg
ggagctcaagacctccagtccaaggctgccgacttgaaccagacactctcaaggagagat
ggaactccagaaaaaagcctgaagcagatgaaggaggagatccaggccatgctagccgag
atgagaaaacgacagctgggaggaaagaagagcatcgccgaggaggagatggacctcgca
gaggagttgtatcagaaagtgaagagattatttggcgacccccatcaggccacagaagac
ctaaaagcagagatcaaagagaagctgtccgaccatgaggggaagctgcaggacgcccag
gacctgctgcactccgcccagggaaagacgaggcaggccggctcactggctgaacaaaac
caagctaacctcacagccctggagagaaagcgctctgcagtgagcggggtgagacaggaa
gcccaggaggtccttggagaaggagaacatcttctggatgaagcaaaccagctttctgac
aacatcaacaaggaaatagaggacctggaggagatggccggagagctcggtccgctacac
gaccagctggatgataaagtcagtcacctcaccggtggtttaggggacggcagtctggcc
aatcacgtccacgacgcagaggaacacgccaagcagctgaacgaatctgctgccattttg
gatggtattttggctgaagctaaaaatctctccttcaacgcaacagctgccttcaaggcc
tatagtaacattaaagccaacgtcgatgcagcggagaaggaggcgaaggcagccaagcag
agggcaagcgaggcacttgcactggctttagatccagaggtcccagtcaaggaagcagct
caagtggcccatcagaagagccacaaactgctaaaccaagctaaacaacttcaaaatgat
gtcaaagagaatgcagatgatgtagcggggctgaagggcagagttaaagcagcgagagac
aaaaccaaagacctgctgaaagctgtcaacggaaccatggcaacgctcaacgcgatcccc
aatgacacagcagctcagctcgcagccacgaaggccgtagcggcagatgctaacgccacg
gccatagacgtcctggagcgccttggggatttgaacctgcaactctacggcctacagagg
aaccacactgagctggaggacacggtcaatgcagccaatcagatgatccaggacccagag
aaaaacatccacgctgcaggagctaaagtgaaggatttagaggatgaagctgataggctc
ttggagaagctgcagccaatcaaacagctgcaggacaatttaaggcggaacatctcgcaa
atcaaggaactgatcaaccaagctagaaaacaagctaactcaattaaagtgtccgtgtca
tcaggtggtgactgtctccgtagttaccgccctgatatcaggaaagggaggtacaatacc
atcatccttcatgttaaaaccaccacagctgataacctgctcttctacctgggatcagcc
aaatatgttgatttcctcgccttagagatgcgtaaggggaaggtgaatttcctctgggac
gtgggttcaggtgtggggagggtagaatatcctcatcacaccatcaatgatgggaactgg
cacagaatagaggcgtctcgtaatgggttgaatggcaccatatcagtatatcctctggaa
ggctctatggctcgtatgatgccgactccggccagtgccaactcgcccacggccttcacc
atcttggacgttgaccagaatgcctacctgtttgtaggaggaataatcggcactgtcaag
aaggcagaagccgtacgaacaacaacgttcaccggctgcattggggagaccttcttggat
gggaaacctattggactgtggaactacagagagagacagggagactgtaaaggatgtgtt
gtcagcccgcagcgtcaagctagtgagggcacagtccagctggatggggagggctacgcc
gccgtgggacggcccaccaggtggaaccccaatgtttcctccgtgaccttaaagttccgc
acattttcctctgaatctctgctgatgtatttggccactgaagatatgaaggactttatg
tccctggagctgtctgagggcaaggtgaaggtgaactttgacctggggtcaggagttggc
agtgccgtgtcagctaaccgccacaatgacgggcgctggaaatccctcaccatgtcaagg
aacaagaaacaagccacggtgaccgtcgtggacattgacagtggtgctgaggagaagata
gtgacctcgtcccagggctcagctgctggtctgaacctcagggagaaccagaagatctat
tttggagggctgcctaccattggaaactacaggtcagaggtcactttgaagcggtatgct
ggctgtctccgggaaattgagatctccaggactccctatagtctcctcagcagctcagat
tatactggggtcactaaaggatgtaacgtagagaacctgtatacagtcagtttctcgagg
ccggggtacatggagctgggtggtctgtcgctagcggtgggcacagagatcagcctgtca
ttcagcactctggcagacactgggaccataatgctggcagtgggcggagcttcaccaatc
ggccagcaggtccgaaacacgaacctcctgagctccaagaggagacgcaggcagtcggga
gagccctacctctcagtcctgctcaacaaaggctctctggaggtcttgttgttcaccggc
agccacagtctgcgtcgtgtcatcagacgacctgagcatggcgtcctgaatgatgggatg
gagcactcgctgcgcatagagaggctacctggcagatctcttgcagttcaggtggatgag
gagaccaagagggaggcagcgcttcccaacgaccagccagtgagcttgcagcgcatcttc
ctcggtggtattcctgcagccgtagaacagacctccaacagagccaacgtcccattccag
ggatgtatatggaacctcatggtcaacgctgttctctcagatttctccctgcccgtgtcc
ttcgagaatgccgaaatcggccagtgccccaacctcgcccccccgccacatctaccgtat
ctgccagaggaagaaaaagagaaggaaaaggaagagtcgaagccattcagtcctccactg
atcgcaaccacagtgacaccggctccaggtcctcctgctgaggccacgcccgccgccaga
cctgctgccacacccactgctgctgcagccccgcccacagctaaacaggagcccagcgct
gatttggactcgtgtgcatcagctgtggccccggcagcgctcgaggaggcataccaattt
ggactgaccaggaacagtcacatgagatttgcttttgatgaaacaaaagtcagagagagg
ctaatattggagtttgagctgaggacgaaggaggagtcgggtctggtgctctacatggca
agaatcaaccatgcagactttgtcaccatacagatcaaggacagacaggtttgtctcggt
tatgatcttggtcatggaaacatatctggctgcgtccccttctccataaacgatgggaac
tggcacaagatccgtgtgactcggaacaagcagagatgtttactgatggttgacggccga
tacagtaaacagatgatcagtccaaagagggctgacctgttggacgtggttgggatgctg
tatcttggcggattaccacaaaactacaccagcaagagaataggaccgatcctgtacagt
atcaatggatgcatccgtcggtttaagatggttgggggggcggtgagcaccaaggctgca
gctacaggccgctctgaggcagtcgtagaggactttaaattgaacatggccacgcccacc
tccagtcacatgatcggaagatgctttgttgccactgagactggaacctattttgaaggc
accggctacctgaaagcagtctcttcttacagagtcggtctggatgtgtcgatagcattt
gagttcaggaccagcagaaccagcggggtgcttttagccgtcagtaaccaagcaaaagat
ggattgggactagagatcgtcgagggaaagctgctcttccacgtggacaacggagctggg
cggattacggcggcgcacacgcctgagggcgaaggcttctgcgacggccggtggcactcc
gtcaccgccaagaagctccgccacagggtggagctgctggtcgacgaccaccagagccaa
gcggagagccccaacgcacgctccaacacctgtgacacaaacgaccccatctacgtcgga
ggatatccggacggagttcgccaggcagctctctcgaccaggacttccttcaaaggttgt
ttgcggaacctgaagatcaccaaagcttctaagaccatggaagtgcagttcaacaaggct
ctcgagattaaaggagtccagcctctctcctgtcctgcggcagcggcctaa
DBGET
integrated database retrieval system
