Pseudoliparis swirei (Mariana hadal snailfish): 130202154
Help
Entry
130202154 CDS
T09868
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130202154 (gtf3c2)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
130202154 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
130202154
NCBI-ProteinID:
XP_056283462
LinkDB
All DBs
Position
12:2856328..2882258
Genome browser
AA seq
929 aa
AA seq
DB search
MDPIDSGPGQDESSALTYSSRGRQCRKNSKYCDYETDVSSDLQISGQNPPKTEAAGGGAA
KKSPVKRGKAESDEKREATDESSEEETPKKSPRAKKTPPKRKTPAKRTPAKKTPAETTPV
SDGAGGVADAAQPENGTPKPKRRYVRKQPPKEPVEEPVEEQEPEEETTPSGRHRRSAAKV
ALKYLHILANEVLNCPGDDLGPPPTGKTQSLKGRNGTVGNASESAVGFPRVLLPVPCVSS
REITRCKSQKRKRCDSDAAEDEDFIPDVEADEDEEEGEEEGTEDEEVEEDSDSGSDRPTP
HHSHKTPNGLTSNMMQTVWDAMNTVKQFRVEHYSSWVFPEWVVSTEVWHLVPPSDLETYL
PQELQSAAFRVNRDGLGKEKTPLERLGRFSAKPAHPDRWDMLLCAGGPVWAMEWCPTPDG
AEASQYVALACHRGMEDKHCVNKTHGGVGLIQLWHLSTLKYNSRPDSQPALAYGLAQDSG
FVWTLKWCPAGGWELPSCDRKAPFLPRLGLLAVATSNSVVTIYSLPHPDALNHSTGLTGK
AGEQLPIYKAEGVLTLKLGSLKAPRHEKSGRVLSMDWLPEKPHNIMAVGFYDGVVGLWDL
TTKSALLRLQEPGSLTLLPYRCLLAHDHAVLALAFCPASRFLLVTAGEDRYVKTWDLRRL
YEPITVQKRYLTNEIYWPLNAPGILLAQENAYAPYGSQGVHYFDHHLRAIFAIPRTSTVW
SISYTEWLNSVVTADGLGEVILSLLPQIGVIPQYIKRTLDRRFPVYLTSLVPHEASEEDD
GGPEEEENVEGDAVEEQEGGEEENGGGGGGKNKCPPLKFQTYEEAAKRNWLQHTDNDMRS
FARSEKRAVWKRMRDTELKTKLNMDERPLAALHKVRFNPNMCCHTWLASGGQTGLVRIHC
LRAMIGSQSKKIIGETRSQVRGQEAGEEL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggatcccattgactctggaccagggcaagacgagtcgtcagctttaacgtacagctcc
agaggacggcagtgcaggaaaaacagcaaatattgtgattatgaaactgatgtttcgtcc
gatctgcaaatttctggacaaaaccccccaaaaacggaggccgcaggaggaggagctgct
aagaaatctccggtaaagaggggcaaagcggagagcgacgagaaacgagaagccaccgac
gaatcgtctgaggaggaaactcctaaaaagtcgccgagagccaagaagactccgccgaag
aggaaaactcccgccaaaagaactcccgccaaaaaaactcccgccgaaacaactcctgtc
tccgatggggcggggggcgtcgccgacgccgcgcagccggaaaacgggacgccgaagcca
aagaggcggtacgtgaggaagcagccgccaaaggaacccgttgaggaacccgttgaggaa
caagaacccgaggaggagaccacgccgagcgggcgccacaggaggagcgccgccaaagtg
gcgctgaagtacctccacattttggcaaatgaagtgctcaactgccccggggacgacttg
ggcccgcccccaacgggcaagacccaaagtctcaaaggacgcaacggtacagtggggaat
gcgagcgagtcggcggtgggattcccccgtgttttacttcctgtcccgtgtgtttcttca
cgtgaaataacacggtgtaaaagccaaaagaggaaacgttgcgacagcgacgctgcagaa
gacgaggacttcattccggatgttgaagccgatgaagatgaagaagaaggggaggaagag
gggactgaagacgaagaggtggaagaggactccgactctggctcggataggccgactcca
catcacagccacaaaacccccaacggcctcacgagcaacatgatgcagacggtgtgggac
gccatgaacacggtcaagcagttccgggtggagcactacagcagctgggtgttcccggag
tgggtcgtctccaccgaggtctggcacctcgttcctcccagtgatctggagacgtacctg
cctcaggagcttcagtctgctgccttcagagtgaacagagacgggctggggaaggagaag
acgcctctggagagactcggcaggttctcggcgaagcccgcccacccggaccgctgggac
atgctgctgtgtgcgggggggccggtctgggccatggagtggtgtcccacgcccgacggc
gccgaggcgtcccagtacgtcgctctggcctgccaccgggggatggaggacaagcactgt
gtcaacaagacgcacggcggagtcggactcattcagctgtggcacctgagcacgctgaag
tacaacagcagaccggactctcagccggccttggcctacggcttggcccaggacagcggc
ttcgtctggaccctgaagtggtgtcctgcaggaggctgggagctccccagctgtgacagg
aaggccccgttcctgcccagactgggtcttctggcagtcgccacctccaacagcgtggtc
accatctacagcctgccccacccggacgctctgaaccacagcacggggctaactggaaaa
gccggtgaacagctgccgatttacaaggcagaaggagtgctgaccctgaagctgggctcc
ctcaaagcccctcgccatgagaagagcggtcgagtcctgtccatggattggctgccggag
aaacctcacaacataatggctgtcggcttttatgacggcgttgtaggtctgtgggatctc
accactaagtcggccctgttgcggctgcaggagccgggctctctgaccctgctgccctat
cggtgcctgctggctcacgaccatgccgtcctggcgctggccttctgccccgcctccagg
ttcttgctggtgacggcgggggaagaccgctacgtgaagacctgggacctgaggcggctc
tacgagcccatcacggtccagaagcgctacctgaccaacgagatctactggcccctgaac
gcaccggggatcctgttggcccaggagaacgcctacgccccgtacggctcacagggagtg
cattacttcgaccatcacttgcgagccatcttcgcaattcctcggaccagcaccgtgtgg
tccatctcgtacacggagtggttgaacagcgtggtgacggccgacggcctcggggaggtg
atcctctcgctgctgcctcagatcggcgtcatccctcagtacatcaagcgcacgctggac
cgccgcttccccgtctacctcacgtctctggtgcctcacgaggcgagcgaggaagacgat
ggaggaccggaggaggaggagaatgtagagggggacgccgtcgaagagcaggaaggagga
gaggaggagaacggcgggggaggaggtggaaagaacaaatgtcctcctctgaagttccag
acgtacgaggaggctgcgaagaggaactggctccagcacacggacaacgacatgcggagc
ttcgcgaggagtgagaagcgagcggtgtggaaacgaatgagagacacggagctgaagacc
aagctgaacatggacgagaggcccctggctgcactgcacaaggtgcgcttcaaccccaac
atgtgctgccacacctggctggcgtccggcggccagacgggcctggtcagaatccactgt
ctgagggcgatgatcggctcccagtccaagaagatcatcggcgagacccggagccaggtc
cgaggccaggaggcgggggaggagctataa
DBGET
integrated database retrieval system
