Pseudoliparis swirei (Mariana hadal snailfish): 130202198
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Entry
130202198 CDS
T09868
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130202198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130202198
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130202198
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
130202198
NCBI-ProteinID:
XP_056283546
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Position
2:complement(16033565..16038288)
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AA seq
344 aa
AA seq
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MKRFRPYSEESHYYLRLPGELLMGWLQTVSLPIMVTSVILGILNLRAPMKIALRAAFIFV
LTTVVAVLIGLMLVLVIKPGAAYTEDEDDQQVEVEFAFMDSLIDLVRNVLPSNVMRLKTN
DTVVQLEGHYVDGTNTLGLIVSALLTGVALKSMGESGQVIVDHMKTINALCKEVVKLIMW
FWPFGLISIIASNIFAVYDLETMHRLREFVLVVIVGLLIHGCVALPALYCLLVRRNLWCC
IKGILPALLTALMISSSVLAGISSLSAAGVPATGAVTTLFVLEVAGLPTENASILFAVEW
ILDRLNTVVNVWSDCICVEIVNALSQRELEEIEQEEQVARAHAE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttccgcccgtactctgaagagagccactactacctccgcctgccaggagag
ctgctgatggggtggcttcagactgtctctcttcctattatggtgacgagtgtcatttta
ggaatactgaacctgagagcgcccatgaagatcgctctgcgtgcggccttcatctttgtc
ctcacgacagttgtcgctgtgctgatagggttgatgctggtcctggtgatcaagcctggg
gcggcttacaccgaggacgaagacgatcagcaggtggaggtagagttcgccttcatggac
tccttgattgatctcgtgaggaacgtgctcccaagtaacgtgatgcgcctgaagacgaat
gacactgttgtgcaactggagggtcactatgtggacggcaccaacacgctgggcctgatc
gtgtccgcccttttgactggagtggccctgaagagcatgggggaaagtggccaggtcatc
gtggaccacatgaagaccatcaacgcgctgtgcaaagaagtggtcaaattgatcatgtgg
ttctggccatttggattgatctccataattgccagcaatatctttgcggtttacgacctg
gaaaccatgcatagactcagagagtttgtgttggtggttattgtcggactcctcatccac
gggtgcgtcgctctcccggccttgtactgcctactggtgagacggaacctgtggtgttgc
atcaagggcattctccctgccttattgactgctctgatgatctcctccagcgtgttggcg
ggcatctccagcctcagcgcagcaggggtcccggcgacgggagccgtgaccaccctcttc
gttctggaggtggcgggcttacccacggagaacgcctccatcttgttcgccgtggaatgg
atcctagaccgcctcaacacggtcgttaatgtctggtcggactgcatctgcgtggaaatt
gtcaacgccctgtcccaaagggaactggaggaaatagagcaagaagagcaggtggcgaga
gcacacgccgagtga
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