Pseudoliparis swirei (Mariana hadal snailfish): 130202251
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Entry
130202251 CDS
T09868
Name
(RefSeq) voltage-dependent calcium channel gamma-4 subunit-like
KO
K04873
voltage-dependent calcium channel gamma-8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130202251
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130202251
04261 Adrenergic signaling in cardiomyocytes
130202251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130202251
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130202251
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Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
AA_permease_2
DUF2269
Motif
Other DBs
NCBI-GeneID:
130202251
NCBI-ProteinID:
XP_056283638
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Position
1:complement(19645214..19659346)
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AA seq
473 aa
AA seq
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MEAKGRNMHPDLSFLPRPAMVWCERGIQVLLTTMGAFAAFALMTVAIGTDYWLYARAFIC
NSTANSSQDDSNNMDKKDPGALTHSGLWRICCLEGLKRGVCSQINHFPDDVDYDQDSAEY
LLRVVRASSIFPILSAVLLLLGGVCVACSSFYKSKRNIVLGGGILFVAAGLSNIIGVIVY
ISAALSDISPKKDEDKKWHYSYGWSFYFGGLSFILAEMVGVLAVNIYIEKNKELRCRSRA
DLFKSTTHAVLRLPSYRFRRRSRSSSRSTDPPRSQEGSPVGASNKTFSLPPSAPPFSVAT
LPNPHHGGGGGGGGGGDISMYTLTRDSKLGSLGGGAPPLYGTVDRSTLYQLHNYFPKEST
GGGGGGRSGSGSGGAAVSGGAAVSGGGGGTLPSHSKSNLAAAAAAAAAAAAAVAQNAAPL
NTSASAATPTQAAPISTATMERDRGNMGTLDRLTAKRDRDSNSDTLNRKTTPV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaaaggcagaaacatgcatccagatctcagtttcctcccccgcccggcgatg
gtgtggtgcgagcggggcatccaggtgctgctgaccaccatgggggcgttcgcggccttc
gccctcatgacggtggccatcggcaccgactactggctgtacgcccgcgccttcatctgc
aacagcacggccaactcgtcgcaggacgactccaacaacatggacaagaaggaccccggg
gccctcacccactccggcctctggaggatctgctgcctggaaggcctgaagcgaggtgtg
tgttcccagataaaccatttcccagacgacgtagactacgaccaagattctgcagagtat
ctgctgcgtgtggtccgggcctccagcatcttccccatcctcagcgccgtcctgctcctg
ctgggcggcgtgtgcgtcgcctgcagcagcttctacaagagcaagaggaacatcgttctc
ggaggagggatcctgttcgtggccgccggcctcagcaacatcatcggggtgatcgtctac
atctcggcggccctgagcgacatctcgcccaagaaggacgaggacaagaagtggcactac
tcctacggctggtccttctacttcggcggcctgtccttcatcctggccgagatggtgggc
gtgctcgccgtcaacatctacatcgagaagaacaaggagctgcgctgccgctcgcgcgcc
gacctcttcaagagcaccacgcacgccgtcctgcggctgcccagctaccgcttccgccgg
cgctcgcgctccagctcgcgctcgaccgacccgccgcgctcccaggaggggtcgccggtc
ggcgcgtccaacaagaccttcagcctgccgccgtccgctccgcccttctccgtggccacc
ttgcccaacccgcaccacggcggcggcggcggtggcggcggtggcggcgacatctccatg
tacaccctgacgagggactccaagctgggcagcctcggaggcggcgccccgcctctctac
ggcacggtggaccgctccacgctgtaccagctacacaactacttcccaaaggagtccacc
ggcggcggcggcggcggaagaagcggaagcggaagcgggggagcggcggtaagcggggga
gcggcggtaagcggcggcggcggcggcacactcccatctcactccaagtccaacttggcg
gcggcggctgcggcggcggctgcggcggcggcggccgtagcccagaacgcggcgccgctg
aatacctcggcgtcggccgccacgccgacgcaggcggctccgatatccacggccaccatg
gagagggaccggggcaacatgggaacgctggaccgcctcacggccaaaagggaccgggac
agcaactcggatactctgaacaggaaaaccacgccagtttaa
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