Pseudoliparis swirei (Mariana hadal snailfish): 130202272
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Entry
130202272 CDS
T09868
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130202272 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130202272 (bcor)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130202272 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
130202272
NCBI-ProteinID:
XP_056283644
LinkDB
All DBs
Position
2:complement(2219057..2255320)
Genome browser
AA seq
1812 aa
AA seq
DB search
MVDARLTPLAAMGLDRGTLMHDGLRLHGGVVYPGIRALPVEKSRETSSLPLTYNRDGLPE
LIYKPDGPLDSRKPTNGYLGLYKGIPPGLHKPLLVHGAEGLGLDRRLGPGEKATELALAG
AGGSYLRLPWYSPYPEASMYPFMDTSKYAALNMYKASLLSQPNPYLAQHLAYPSLCASQG
GNPAAVSAAERLYYMPPYPPSPISSPLVAPPMRIPAVTVAPTSMVHCQDKGLGVAPQFAQ
QLHQPSPHAQHHQAAMDRDRSPSRSSRPGRPPSRKGSNNNNTSSSNTSGTNSGNNNSLPT
DSSPHASSRLPQPPPPPALIDNSLDLQRPVARIGHPPTSSASSISASSSSTQSIPHPFSV
SSMASEQPSPARPSPHKSRPRDGAPEHRNAGVERKPSRSPSKPNVERPAHQPQATKDSAE
KPLDLSGRMLEFGLPPNGFPVKMDTLASGARYGLPPSRELLKDKNLSLSPSSHPHSVVSS
TSSKVPERPEMISTLHSSWVVPSPSPSRTQHTPGLPPSPRPNTEMGLSQAKGSSPSVIKH
KGMERVLPQQRSSSCPRTGESNHNVSSTQHPMVSSRALSPKPNGEWVKHSPSHSEHQGHH
REATEKSSHTTKRGETTPELSSYKRPCLENGHAPSHLYLPQSDAYLNHSLVYANRYLHYP
IPDGMALHSLPIAGKGPVYPHPVLLGSNSLYPTHLAAKHPLPYHNLAAGPGGEYLTYNSQ
EMAHPLMQTHSDKLAERGDATLKPRGQEKSRGVVEECGSHSVGKEIGEGSQIKSDWEAGA
QGHGGNQSKPPTSSVTSREKIVCIDLVHSDTDIESTPTVHKQPSAETSSKVNQNECCHGN
QNLTTPEYEPKHQHRLSHPYPIHSGHSPTLKSNHTDRQPETPFGKPKALPDMGCPGGTAS
ASPTSPGRFAQAEESAEERSSSPEPDDQDQSTLRCARTSGERSSGKDKRDCRALHFSQRC
TDVLKEERPCEGETEREDSIVDLGESQGDDDDDDDDDYYEDGMTSPKGSRRSSLAKRIAN
STGYVGDRFKCVTTELYADSSKLSREQRALQMEVISREGSNISQPAANWERAMMRFSELE
LKEKEGGGVCVSTSAAAAGRELEHCQHTTRQGEREGVRPPYANRVPVLQRCGALSEPCMS
PGYGAREGAHQGGLPDGARPGKREPEGGHCLPPTLTPAKGYPEAGPGFGANRKRQQEDAE
WEEGDRASHPEKRAKLSTDEHEAAGPDDEDDDDEVRKLKVCIELKGLRLSKPAAGAASPD
GPLIKQERAWPQPRLVAPVQSQRKIIRPAELEDRAAAAHRAEINRKWGCEKLLNGVSASP
LPPGQLKDRALSPGPFLGDRGGLKEPRRDPPSPAPESCVGGGPPCVKPRRHSDADKPKGK
RPCKTKHTSQREREKRKEATPSSPGSRCAADLGAPEDDKLSEQRGALGKGAASPNHYPCS
PVEPCSPAALCPPTLLPQANGRACCVLPEEVAASAAVAAGLYRAPPLAEAPSVRPIPPEA
RRLIVNKNAGETLLQRAARLGYEEVVLYCLENRVCEVNHRDYAGYCALHEACARGWLSIV
QHLLDYGADINCSAQDGTRPIHDAVENDHLDVVRVLLSYGADPTLATYSGRGLLKMTHSD
GMERFLTDYFSDLQGRADDDLGLYWEFYGSAVCELSEEGGVYDILADPPGPEDEDDKREL
FEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSGRGFRQAFPHMEVVTVAEAE
FYRQASLSQLFSCPEELEGFHADSKDLLDLVEDSGELAALLGSTLECLDDRWERPGERLK
DRIKANHKVGSS
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgcccctggcagcaatggggctggaccgaggcactttgatg
cacgacggccttcgtctccatggtggggttgtatacccaggcatcagagcactgccagtg
gagaagagccgagagacgtcctccctccccctcacttataacagggatggtctcccagag
ctcatctacaagcccgatggccccttggacagtcgtaagcccactaatggatatctgggc
ctgtacaagggcattcctccaggcctccacaagcctttgctggttcatggagctgaaggt
ctcggcttggaccgcagactagggcctggagaaaaggcaactgaactagccttggcaggc
gccggtggcagctacctccgcctgccttggtacagcccctatcctgaagccagcatgtat
cccttcatggacacatccaagtacgcggctctaaacatgtacaaagcctctttgctaagc
caacccaacccctatcttgcccagcacctggcatacccatctctgtgtgcatcccagggg
ggcaaccctgctgctgtgtccgctgccgagagactctactacatgcccccctatcctcct
tcccccatctcttctcccttggttgcaccaccaatgaggattcctgcagtgacggtggcc
cccacgtccatggtccactgccaggacaaggggcttggtgttgcgcctcagtttgcacag
cagcttcaccaaccttcccctcatgcgcagcatcatcaggctgccatggacagggaccgg
tcccctagcaggagcagcaggccaggcagacctccctctaggaagggctctaacaacaat
aataccagcagctctaacactagtggcaccaatagtgggaataataatagtctgcctact
gattcttctcctcatgcatcttctcgccttccccagcctccccctcctcctgcccttatt
gacaactcactggatttacaacgcccagttgctagaataggacacccaccgacctcctcc
gcctcttcaatatctgcatcatcctcatctacgcagtccattcctcatccattctctgta
agcagcatggcatcagagcagccttctcctgcccggcccagcccccataaatctaggcca
agagacggggcacctgagcacagaaatgcaggggttgagaggaaacccagcaggtcaccc
tccaaacctaatgttgagaggccagctcaccaaccccaagcaaccaaagactcggcagag
aagcccttggatttgtctggaagaatgctggagttcgggttgcctcccaatggattccca
gttaagatggacactttagcttctggcgcacgttatggactgccccctagccgagaactc
ctaaaggacaaaaacctatccctctctccttcctcccacccacactctgtggtcagcagc
acttcttcaaaggtcccagaaaggccagaaatgataagcactttacactcctcctgggtt
gtacctagcccgtctccatcccgtacacagcacacgccaggcttgcccccctccccaagg
cctaacacagagatgggcctttctcaagccaaaggctcctcgccctctgtcatcaaacac
aagggtatggagagagtacttcctcagcaacgtagctcatcctgtccaaggaccggggag
tccaaccataatgtgtcctccactcaacacccgatggtcagctccagggctctttctccc
aagcccaatggcgagtgggtcaaacatagccctagccattcagaacaccaaggccaccac
agagaggcaacggagaagtcctcccacaccactaagagaggtgaaacgactccagaactg
tcatcgtacaagaggccctgtttagagaatggtcacgcccctagccacctttaccttcct
caaagtgacgcttacctgaaccacagtttggtatatgccaatcgatacctgcactacccc
atccccgatggcatggcgctacactccctgccaattgcagggaaaggcccagtctaccct
cacccagtactgctgggcagcaacagcctttacccaacccacttggcggcaaaacaccct
ttaccctaccacaacctcgccgctggtccaggaggggaatacctcacttataactcgcaa
gagatggcccatcccctgatgcaaacgcactcagacaagctggcggaaaggggagatgca
accttgaagccccggggacaggagaaatcccggggggttgtcgaagaatgcggtagccac
agcgtagggaaagagataggcgaaggaagccaaattaagtctgattgggaagcaggagca
caaggacacggtggcaatcaaagcaaaccccccacgtcttctgtaacatccagagaaaag
attgtttgcattgaccttgtacactcagacacagatattgagtctaccccaacagtccac
aaacagccctctgctgagaccagcagcaaggttaaccaaaatgaatgttgtcacggtaac
caaaatctgacaacgcccgagtacgagccaaaacaccaacaccgcctttcccatccttat
cccatccactccggacacagccccaccctgaagtccaatcacaccgatagacagccagaa
accccctttgggaaaccaaaggctctcccggacatgggctgtccgggggggaccgccagc
gcatcgccgacttcgccagggcggttcgcccaagccgaggagagcgccgaggagcggagc
tccagcccagagcccgacgaccaagaccagagcaccttgcgctgtgcccgcacatctggg
gagcgcagctccggtaaggacaaacgggactgccgagcgctccacttctctcagcgctgc
accgacgtgctgaaggaggagaggccgtgcgagggggagactgaacgagaagacagcatc
gttgacctaggggagtctcaaggggacgacgacgacgacgacgacgacgactactacgaa
gatggcatgacgtcaccgaaaggctctcgtagatccagtctggccaagaggatcgcaaac
tccacaggctacgttggcgaccgctttaaatgtgttaccactgagctgtatgctgactcc
agcaagctgagccgtgaacagagagccctgcagatggaagtcatatcacgagaggggagt
aatataagtcaacctgcagctaactgggagcgggcaatgatgcggttctcggagctggag
ctgaaggagaaggagggcggcggtgtgtgcgtgtctacctcggcagcggcagcaggacgg
gagctggaacactgccaacacaccaccaggcagggagagagggagggtgtccggccgccg
tacgccaacagggtgccggtcctccagaggtgcggggccctgagcgagccctgcatgtcc
ccagggtacggggctcgagagggggcccaccagggcgggctgcccgacggggccaggccg
gggaagagggagccagaagggggccattgtttgccccccactctgacgccggcgaaaggg
taccccgaggccggccccggcttcggggccaacaggaaacgccagcaagaggacgcggag
tgggaggaaggagaccgggcgtcccacccggagaagagagccaagctttctacggacgag
catgaggcggccggccccgacgacgaagacgacgacgacgaggtccggaagctcaaggtc
tgcatcgagctgaagggcctgcggctcagtaagcccgccgccggcgccgcctcccccgac
gggcccctgatcaaacaggagagggcgtggcctcagccccgactggtggctccggtccag
agtcagcgcaagatcatccggcccgccgagctggaggacagggccgccgcggcgcaccga
gccgagatcaacaggaagtggggctgcgagaagctgctcaatggagtatctgcgtctccc
ctcccccccggccagctgaaggacagagcactctctccgggccccttcttgggtgaccgc
ggcggcctcaaggagcccaggagggaccccccgtctccggccccggagtcgtgcgtggga
ggcggccccccttgtgtcaagccccgtcgccatagcgacgcggacaaacccaagggcaag
cggccgtgcaagaccaagcacaccagtcagcgcgagcgggagaagaggaaagaggccacg
cccagcagcccgggctcgcgctgcgcggcggatctgggagcgccggaagacgacaagctg
agtgagcagcgtggcgctctggggaagggagccgcctccccgaatcattacccctgctct
ccagtcgagccctgctcccccgccgcgctctgtccgccgaccctgctgccccaggcgaac
ggccgggcgtgctgcgtcctgccggaggaggtggcggcgtcggcggccgtggcggcgggg
ctgtaccgggcccctccccttgcagaggccccctcggtgcgccccatcccgccggaggcc
cgccggctgatcgtgaacaagaacgccggcgagacgctgctccaaagagcggcgcggctg
ggctacgaggaggtggtgctgtactgtctggagaacagagtctgcgaggtgaaccaccgg
gactacgccggctactgcgctctgcacgaggcgtgcgcccgcggctggctgagcatcgtc
cagcacctgctggattacggcgccgacatcaactgcagcgcgcaggacggcaccaggccg
attcacgacgccgtggagaacgaccacctggacgtggtgcgagtgctgctgtcgtacggc
gccgaccccacgctggccacgtactctggccgcggcctgctgaagatgacccacagcgac
ggcatggagcgcttcctcaccgattatttctccgaccttcagggacgcgccgatgacgac
ctggggctttattgggaattctatggcagtgccgtgtgtgagctgagcgaggagggaggc
gtgtacgacatcctggccgatcccccgggcccggaggacgaggacgataagagggagctg
ttcgagttcgagttctccgaccgacctctgctgccgtgctacaacatccaggtgtccctc
tctcaggggcccagaaactggctgctcctgtcagacgtgttgcgccggctgcggatgtcg
ggtcgcggcttccggcaggccttcccccacatggaggtggtgacggtggcggaggcggag
ttctaccggcaggcctccctgtcgcagctcttctcctgcccggaggagctggagggtttc
cacgccgacagcaaggacctgctggacctggtggaggacagcggcgagctggccgccctg
ctgggctccacgctggagtgtctggacgaccgctgggagcggccgggggagcggctgaag
gacagaatcaaggccaaccacaaggtgggctcgtcctga
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integrated database retrieval system
