Pseudoliparis swirei (Mariana hadal snailfish): 130202288
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Entry
130202288 CDS
T09868
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03420
Nucleotide excision repair
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130202288 (ercc1)
03460 Fanconi anemia pathway
130202288 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130202288 (ercc1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130202288 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
130202288
NCBI-ProteinID:
XP_056283673
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Position
2:complement(12340218..12343866)
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AA seq
356 aa
AA seq
DB search
MKKRFNINLDDTAFAKERTPPKPQFQPSSKGGQNTSGSTSSSAKPASEPVEQPLSYAEYI
VRKNNAAALEGSSKLLNADDAGETNGKQSESDSGSSAAVCCDPLQGRAEGGEGESGGVKT
SEDPQVAGTHQKEGNCQRSDPILTLGPKPMGSGSSIIVSPRQRGNPILKCVRSVPWEFGD
VVPDYVLGQTTCALYLSLRYHHLNPNYIHDRLKLLGNTFTLRVLLAQVDVKDPHHTLKEL
ARICIMADCTLILAWSPEEAGRYLETYKSYENKPADMLKEQVEKNYLSKVTDCLTTVKYV
NKTDAITLLSTFSSVEGIINASKEDLVLCPGLGPQKARRLYDVLHKPFLKSKTKDG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggtttaacatcaacctggatgacacggccttcgccaaagaaagaacaccg
ccaaagccacaatttcaaccttcatccaaaggaggacaaaacacctcgggttctacttca
tcttcagcaaagcctgcttctgaacccgtggagcagcctctttcctatgcggaatatatc
gtccgtaaaaacaatgcggctgcattggagggttcctccaaactgctaaatgctgacgat
gcaggagagaccaatgggaagcaaagtgagtcagattcagggtcctctgctgcagtttgc
tgtgacccccttcagggccgtgctgaagggggtgaaggtgaatctggaggggtcaagacg
agcgaggacccgcaggtggctggcacacaccagaaagaggggaactgtcaaaggtcagat
ccaatccttaccctgggcccaaaaccaatggggtctgggagcagcattatcgtcagtccg
cgacagaggggaaatcccatcctgaagtgtgtgagaagtgtcccttgggagtttggagat
gttgtaccagactatgtcttgggtcagacaacttgtgctctctacctcagtttgagatat
caccatctcaatccaaattatatccacgaccgtctgaagctgcttggaaatacttttacc
ctgcgagtgctactggcacaagtagatgtgaaagatcctcatcatacattgaaggagctg
gctcgcatctgcatcatggctgactgcactctcatcttggcttggagtccagaggaggca
gggcgttacctggaaacgtataagtcgtacgaaaataaacctgcagacatgctgaaggag
caagttgagaaaaactacctatcaaaggttactgattgcctgaccactgtgaagtatgtg
aacaagaccgatgccattaccttgctgtccactttctcatctgtagaaggaatcatcaat
gcctcaaaggaagacttggttctctgtccaggcctcggaccacaaaaagcacgccgactc
tacgatgtgctgcataagcccttcctcaagtcgaagacaaaagacggctga
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