Pseudoliparis swirei (Mariana hadal snailfish): 130202289
Help
Entry
130202289 CDS
T09868
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130202289 (brf1b)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
130202289 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
130202289
NCBI-ProteinID:
XP_056283670
LinkDB
All DBs
Position
12:complement(381045..419267)
Genome browser
AA seq
667 aa
AA seq
DB search
MSSRVCRTCGGSDIDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTSVGKESRAQTLQGGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHRLEFGLQTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVISVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMKVDLEQECDPPSFTAGQNK
AKMQQLEHELARKLDEVEGEISCYKDEIETELEKSRPKLRGIYAAYSKETDPDGVHVSSL
TSEPAVQEVKDPDFQAAAQHLTQDFLCEAIQEEEGRGKKEGAGPHRQAAPLAAILGSLPS
VASLSLQQTFTGSEEGEDPDDERSESGDLDLQDIDDQEIDDYILDDWEVEVKTELWMKQN
AEYLKEQKEKEERIRKEKEQGTYKEKPMKSKKKKQPAAALTAGEAIERMLEKKKISSKIN
YDVLRDLNSRGTGGVGGGSPSRATPDPPTRRRLVRRRKTSEANQDLGATTSTMGKRVRLL
LSSKSKKKTSVQAENTVTMTTEASSPGLELDRSPAPVTPPPEEQQEDECVSALQLVGDYG
CEEEEVF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgcaggacctgtggggggtccgacatagacgtggatcaggcccgg
ggcagcgcggtgtgtaccagctgtggttcggttctggaagataacatcatcgtctcggag
gttcagttcgtggagggaagcggaggcgtttcctcggctgtgggacagttcgtgtctgcc
gacggtccagttaaggccccccttcttggttctggttttcacaccagtgttggaaaagag
tccagagcccagaccctgcagggcggtaagcgtcagatccagcagctgggcagtcagctg
cagctgaaccagcactgtctggacacggccttcaacttcttcaagatggttgtcagtaaa
cacctgacccgaggacgcaagacggagcacgtcatcgccgcctgcctctacctggtgtgt
cgcaccgaggggacgccacacatgctgctggacctgagtgacctgctgcaggtgaacgtt
tatattctggggaaaacctttctgctgttggctcgtgagctctgcatcaacgctcccgcc
atcgacccctgtctctacatccctcgttttgcccacaggttggagttcgggctgcagacc
catgaggtgtccatgacggctctgcgtctggtccagaggatgaagagggactggatgcac
accggccgccggccgtcgggcctctgtggggccgcgctcctggtagcagctcggatgcac
aagtttcgtcgtacggtgaaggatgtgatcagtgttgtgaaggtctgccagaccactctg
agaaagagattaacagagtttgaagacacgcccaccagtcagctgaccattgatgagttc
atgaaagtcgacctggagcaggaatgtgatccaccctccttcacggccggacagaacaaa
gccaagatgcagcagctggaacacgagctggccaggaaactggatgaggtcgaaggagag
atcagctgctataaagacgagattgagacggagctggagaagagccggcccaaactccga
gggatctacgccgcctacagcaaggagacggaccctgatggtgtccacgtctcatccttg
acctctgaacccgccgtgcaggaggtcaaggaccccgatttccaagccgccgcccaacac
ctgacccaggacttcctgtgtgaggcgattcaagaggaggaggggcgggggaagaaggag
ggggcgggacctcaccggcaggccgctcctctggccgccatcctgggaagtctgccaagt
gtagccagcctgagcctccagcagaccttcaccggctcggaagagggcgaggacccggac
gacgagcggtcggagagcggagacctggacctgcaggacatcgacgaccaggaaatcgat
gattacatcctggatgattgggaggtggaggtgaagacggagctgtggatgaagcagaac
gcagagtacctcaaggagcagaaagagaaggaggagcggatcaggaaggagaaggagcag
ggcacctacaaagagaagcccatgaagtccaagaagaagaagcagccggcggcggcgctg
acggcgggcgaggccatcgagaggatgctggagaagaagaagatctccagtaagatcaac
tacgacgtcctcagagacctgaacagcagagggacaggaggtgtgggggggggcagtccc
agcagagcgacccccgacccccccacacgaagacgactcgtccgccgccggaagaccagc
gaagcaaaccaagacctcggcgccaccaccagcaccatggggaagagggtccgactcctg
ttgtcctccaaatcaaagaagaagacatccgtccaggcagaaaacaccgtcaccatgaca
acagaggcttcatctcctggactcgaactggacagaagccctgcccctgttaccccgccc
cctgaggagcagcaggaggacgagtgtgtcagcgctctgcagctcgtcggggactacggc
tgtgaggaggaggaagtcttctaa
DBGET
integrated database retrieval system
