Pseudoliparis swirei (Mariana hadal snailfish): 130202338
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Entry
130202338 CDS
T09868
Symbol
tube1
Name
(RefSeq) tubulin epsilon chain
KO
K10391
tubulin epsilon
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130202338 (tube1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130202338 (tube1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130202338 (tube1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130202338 (tube1)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130202338 (tube1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
130202338
NCBI-ProteinID:
XP_056283778
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All DBs
Position
12:18932965..18952042
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AA seq
474 aa
AA seq
DB search
MTQSVVVQMGQCGNQVGCRFWDLALREHAHVNKNGLYDDALGSFFRNVDSRESDGGACGI
GGRIQRLKARAVLVDMEEGVVNEILQGPLRELFDSTQLLTGVSGSGNNWAVGHMTYGSAY
REQIVDTLRKAAEHCDCLQCFFLIHSMGGGTGSGLGTRVLGLLEEEFPEVCRIVSSIYPS
AEDDVVTSPYNSVLAMRELTEHADCVLPVENQSLVDIVNKIRQMSHGGRPGSAIKRDSAV
ISGQGGLSGAEKPFDAMNNIVANLLLNITSSARFDGSLNMDLNEIAMNLVPFPRLHYLVP
SLTPLYTLADVSVPTRRLDQMFSDAFSKDHQLIRADPKRCLYLACALMVRGNVQVSDLRR
NIERLKPSLPFVSWNQEGWKTGLCSVPPVGHSHSLLALANNTCVKTTFMELRERFTKLYR
KKAHLHHYLQVEGMEQSFFSEALGSLSSLIEEYHELDATKGRLMPDAPRLSIAT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtccgttgttgtccagatgggccagtgcggcaaccaggtcggctgcaggttc
tgggatcttgctttgcgagaacacgcccatgtcaataaaaatggattgtatgatgatgca
ctcggtagctttttcagaaacgtggactcaagggaaagtgatgggggagcctgtgggatt
ggtgggagaatccagcgtctgaaggccagggcagtgctggtggacatggaagagggtgtg
gtcaacgagatcctgcagggcccattgagagagttgttcgacagcactcagctcctcaca
ggcgtgtcaggttcaggcaacaactgggcagtcggacacatgacttatggctcggcctac
agggagcagatagtggacacgctgaggaaggcagcagaacactgcgactgtctgcagtgc
ttcttcctcattcactctatgggaggaggtacgggctccggcctggggaccagggtgctg
ggcctgctcgaggaggagttccccgaggtgtgccgcatcgtctcctccatctatccgtct
gcggaggacgacgtcgtcacctccccctacaacagcgtcctggccatgagggaactcacg
gagcacgccgactgtgtcctgccggtcgaaaaccaatcgctggttgacattgtgaacaag
atcaggcaaatgtctcacggtgggaggccagggtcggcgatcaagagggacagcgccgtc
atctccgggcagggcgggctcagcggggcggagaagcccttcgatgctatgaataatatc
gtggctaacctgctgctcaatattaccagctccgctcgtttcgacggatccctaaacatg
gacctgaacgagatcgccatgaacctggtgcccttccctcgtctgcactacctggtgccc
agcttgacccctctctacacgctggctgacgtcagtgtccccaccagaagactggatcag
atgttcagcgacgccttcagtaaagaccaccagctgatccgagccgacccgaaacgctgc
ctctacctggcctgcgccctcatggtcaggggcaacgtgcaggtgtccgacctccgcagg
aacatcgagagactgaagccctcgctgccctttgtctcgtggaaccaggagggctggaag
acgggcctgtgttcggtgcctcccgtgggccactcccactccctgctggccctggccaac
aacacctgtgtgaagaccacgttcatggagctgagggaacgtttcaccaagctctacagg
aagaaggctcacctccaccactacctgcaggtcgaaggaatggagcagagcttcttctca
gaggctttgggctctctcagctcgctgattgaagagtaccacgagctggacgccaccaag
ggcagacttatgcctgacgcacccagactcagcatcgccacatga
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