Pseudoliparis swirei (Mariana hadal snailfish): 130202384
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Entry
130202384 CDS
T09868
Name
(RefSeq) prospero homeobox protein 1-like isoform X1
KO
K20211
prospero homeobox 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202384
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
130202384
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPD
Nop25
NifQ
Motif
Other DBs
NCBI-GeneID:
130202384
NCBI-ProteinID:
XP_056283857
LinkDB
All DBs
Position
12:8955508..8988533
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AA seq
848 aa
AA seq
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MPDHDSDSLLNRQTKRRRVDIGVKRTVGSTASAAAATTTTTTDNIARAKAAIFSAMNSLS
SHSHHGSDTDSMECSVVQPHGGPGIVSGSDNESKSNVLRKLLKRANSYEDTMMPFPGTTI
ISQLLKNNMAKNGGGPERRERGDRGDRGDAGFPGSGLSNASSDAPQEDACSNSSHDSTPQ
ECLSPFGRPGLAPFEMERLNDEHLRAKRARVENIIRGMSHSPSVVVPAASRHERDHEMDR
HHEMDLDCPPPQSQQQAPSSPRGGEVCSSSSRENKRKQRLPQQQQQSFTQLVCQRKEQKQ
EERRQLKLQLEDMQKQLRQLQEKFFQIYDSTDDSEHNDLHNELNNDMGNMSEDSPARSDT
GGDDRGGDDLRSDNEMSDLDPGHFLDRARALLQEQALLAAREKPRREGLSRSKGPGGPGS
SMHAEGKQLAETLKQELNSAMTQVVDTVVKVFAKPPRPTPQQAFPSLSIPPERFPTTVNG
DNPNFHTANQRLQCFGNVIIPNPLDSFTSMPGMPGPTSDQTEALPLIVRKTPSEHHHHHH
HQSSAVGAHGGHHHPILHPSSLSASMGFSPPSFRHPFPLPLMGYPFQSPLGGPTGGYPGR
DRSSPDSMDLSRETTSLRTKMASAHHLGHHHRSCSPAHPGSTAELSLSLIKSECSDLQDM
ADISPYSGSNIQEGLSPNHLKKAKLMFFYSRYPSSNMLKMFFSDVKRQASVFGPVMCCGV
AEFNRCITSQLIKWFSNFREFYYIQMEKFARQSINDGITGVEEMGVSRDSELFRALNMHY
NKANDFEVPERFLEVAEITLREFFNAILAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPN
CLQELLHE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccatgacagcgactccctcctgaacagacagaccaagcgaagacgtgtggac
attggtgttaagaggaccgtgggcagcacagcctccgcagcagcagcaaccacaacaaca
accactgataacattgcccgcgccaaagcagccattttcagtgccatgaactctctgagc
tcccactctcaccacggatcagacaccgactccatggagtgctctgtagtgcagccacat
ggtggacctggcattgtgtcaggcagcgacaatgaatccaagtccaatgtactccgaaag
ctactgaagagggccaactcgtacgaggacactatgatgcctttccctggcaccactatt
atctcccagcttcttaagaataacatggctaaaaatgggggaggacctgagaggagagaa
agaggggacaggggtgatagaggggatgccggcttccccggatcagggctctccaatgca
agttcagatgctccccaggaggatgcctgcagtaactcctcccacgatagcacccctcaa
gagtgcttgtcaccctttggtcgtcctggcctagccccctttgaaatggaacgtctcaac
gatgaacatctgcgtgccaagcgagcccgcgtagagaacattatacgtggcatgagccac
tcgcccagtgtggtggtacctgccgcttcccgtcacgagcgtgaccacgagatggatcga
caccatgagatggatctcgactgcccaccccctcagtctcagcagcaggcccccagcagc
ccacggggaggcgaggtatgcagcagtagcagccgagagaacaagcgtaagcagcgtctg
cctcagcagcagcaacagagcttcacccagctggtgtgccagaggaaggagcagaagcag
gaggagcggcggcaactgaagctgcagctggaggacatgcagaagcagctccgtcagctg
caggagaagttctttcagatctacgactcgaccgacgactcggaacacaacgacctccac
aatgagctcaacaatgacatggggaacatgtccgaagacagcccagccaggtccgacacc
ggcggcgatgaccggggtggagatgacttgcgctctgacaatgagatgtctgacctggac
ccaggccatttcctggacagagcgcgggccttgcttcaggagcaggccctgctcgcagcc
agagagaagcccagaagagaggggctcagccggagcaaaggaccgggaggtccgggctcc
tccatgcacgctgaaggcaaacagctggccgaaacactgaagcaggaactcaattcagcc
atgacccaggtggtggacacagtggttaaggtgtttgccaagcctccacgccctacaccc
cagcaagccttcccctcactttcgatacctcctgaaagatttccgaccactgtcaacgga
gacaaccccaactttcacaccgccaaccagaggctgcagtgcttcggcaatgtcatcatt
cccaatccactagactccttcaccagcatgccagggatgccaggtcccaccagtgaccaa
actgaggcattacccttaatcgtgaggaagacaccgagtgagcaccaccaccaccaccac
caccagtcctcagctgtgggtgcccatggcgggcaccaccaccccatccttcacccctcc
tccctctctgcttccatgggcttcagccccccatcttttagacacccttttccactgcct
ctcatgggctaccctttccagagtcccctcggcgggcccacgggtggctacccaggcaga
gaccgctcctccccagactccatggacctgtcccgggagaccaccagcctgaggaccaag
atggcatcggctcaccatctggggcaccaccatcgctcgtgttcaccagcgcaccctggt
agcacagccgagctctccctgtccctcatcaagtctgagtgcagtgacctccaggacatg
gctgacatctcaccttactcaggcagcaacatccaagagggtctctctcccaatcatctg
aagaaggccaagctcatgtttttctacagccgctacccaagctctaatatgctcaagatg
ttcttctcggatgtcaagcgccaagcttcagtttttgggccagtcatgtgctgtggagta
gcagagttcaatcgctgcatcacctcccagctgatcaagtggttcagcaacttcagggag
ttctactacatccagatggagaagttcgcccggcagtccatcaacgacggaatcactgga
gtcgaggagatgggcgtcagccgcgacagcgagctgttccgagccctcaacatgcactac
aacaaggccaacgactttgaggtccctgaacgcttcctggaggtggccgagattacactg
agggagttcttcaacgccatcctggccggcaaagacgtggacccatcctggaagaaggcc
atctacaaggtcatctgcaaactggacagcgaggtccccgagatcttcaagtcccccaat
tgtctccaagagcttctacacgagtaa
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