Pseudoliparis swirei (Mariana hadal snailfish): 130202401
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Entry
130202401 CDS
T09868
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130202401
04082 Neuroactive ligand signaling
130202401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130202401
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130202401
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130202401
NCBI-ProteinID:
XP_056283894
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Position
12:3073395..3092811
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AA seq
473 aa
AA seq
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MPAYARFLFVLLCVVLLGECRRHRTRRKRWSGPTETHKPGNPLTKKAADGTKSKKVKMSH
LLRIDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLVFPS
STNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAA
CNMDFTRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQEFHTSS
RLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVRDGKDR
KLREKARQQSQLPCSCGMSHARTMMMDGTYSEADANSLAGYTRTSVGAEDSSEKQERMVV
RLSLHNEPAGGAKKKGLRGFRIIQNTHAIDTYSRMIFPGAYILFNLVYWCMYC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttacgcgcggttcctgttcgtgctgctgtgcgtggtcctgctcggggagtgc
aggaggcacaggacgaggagaaagcgctggtccggacccacggagacccataagcccggc
aaccctctgaccaagaaggccgcggatggaaccaaatccaaaaaggtgaagatgagccac
ctgctgcgcatcgacgaccacgacttcaccatgaggccggccttcgcaggtccagctgtg
cccgtcggagtggatgttcaggtggagagcttggacagcatatccgaggtggacatggac
ttcaccatgaccctgtatctgaggcactactggaaggatgagcggctggtcttcccgagc
tccaccaacaagagcatgaccttcgacggccgcctggtgaagaagatctgggtccccgac
gtgttcttcgtccactccaagaggtccttcatccacgacaccaccaccgataacatcatg
ctgcgggtgttccccgacggacacgtcctctacagcttgagggttacagttacagctgca
tgcaacatggatttcactcgttttcctttggactctcagacgtgcacgctggagctggag
agctatgcgtacacggacgaagacctgatgctctactggaaaagcggcgacgagtccctg
agcaccgatgacaggatttctctgtctcagttcctcatccaggagttccacaccagctcc
cggctggcgttctacagcagcacaggctggtacaaccgcctgtacatccacttcaccctg
cggcgccacatcttcttcttcctgctgcagacctacttccccgccaccctcatggtcatg
ctgtcctgggtgtccttctggatcgaccgcagggccgtccccgccagggtctcattaggc
atcaccacggtgctcaccatgtccaccatcatcaccggggtcaacgcctccatgccccgg
gtgtcctacatcaaagccgtggacatctacctctgggtcagcttcgtcttcgtgttcctg
tcggtgctcgagtacgccgccgtcaactacctgacgacggtgagggacgggaaagaccgc
aagctcagagagaaagccaggcaacagtcgcagctcccttgctcctgcggcatgtcccac
gccagaaccatgatgatggacggcacgtacagcgaggcggacgccaacagcctggcgggc
tacacgcggacctccgttggcgccgaggactcgtcggaaaaacaggagcgcatggtggtg
cgtctctccctgcacaacgagcccgcggggggcgccaagaagaaaggcctccgcggcttc
cggatcatccagaacacccacgccatcgacacctactctcgcatgatcttccccggcgcc
tacatcctgttcaacctggtgtactggtgcatgtactgctga
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