| Entry |
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| Symbol |
prpf39
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| Name |
(RefSeq) pre-mRNA-processing factor 39 isoform X1
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| KO |
| K13217 | pre-mRNA-processing factor 39 |
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| Organism |
pswi Pseudoliparis swirei (Mariana hadal snailfish)
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| Brite |
KEGG Orthology (KO) [BR:pswi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:pswi03041]
130202407 (prpf39)
Spliceosome [BR:pswi03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130202407 (prpf39)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:4762730..4769971
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| AA seq |
798 aa
MEDTDLHFSDDPITGMLDTESPVMESNGDAFLPDLPVLGQTADWSPGQVTPDPLANILPE
DSDASQDAPLQQQSPNEEMDSSELGSVERAVEHFQIATAQLFQVEQPPPPPLPAEEEERP
EQPQPPAEHKTESGEYEQYGLEMTVMPEALVHYGSQDETEVPQVTEDGMELEEAPKETTL
ELTVPLEPEQPSEFEKLFKACEYSPDDFNGWVYLLQFVEQENDLTDVRNSFDAFFLRYPY
CYGYWKKYADIEKKHENIQVAEEVYRRGLQAIPLSVDLWLHYLTYIKENSDMSDPETEGR
IRAAFEHAVLAAGTDFRSDRLWESFINWETELEKLANVTTIYDRILGIPTQLYSQHFQRF
KDHVQNNNPKHFLPEEEFVQLRLELSKDSLLAMIGEVEDAPAAHEELPPGTDDLVDPAKR
VTEIENMRHKVIEIRQELFNHNEHEVSKRWAFEEGVKRPYFHVKALEKTQLNNWKEYLDF
EIENGIPERVVVLFERCLIACALYEEFWTKYAKYLEGHSTDGVRHVYKKACSIHMPKKPT
IHLLWAAFEEQQGNVEEARGILKSLEEAVPGLAMVRLRRVSLERRHGNLEEAEALLQEAM
ESAKNATETSFYAVKLARQMMKVQRSLSKARKVLLDAIEKDQASPKLFLNLLELEYSGDV
LQNEAAILACFDRALQSQMPLESRLLFCQRKVEFLEDFGSDINVLVATYEEHQNLQKESE
TSKRKAENGYDSSQEPDAKRQRVEDGTSDEVNAAADAQANNSAYNNWYQQQYGGWGQNSW
GQYNQYAQYNQYYPPPPT |
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| NT seq |
2397 nt +upstreamnt +downstreamnt
atggaagacacagatctgcatttttctgacgaccccattactggaatgctggacactgag
tcccctgtcatggagagcaatggagatgcctttcttcccgaccttcctgttctaggtcaa
actgctgactggtcccctggccaggttactccagacccactcgccaacatcttgcctgag
gactctgatgcgtcccaggatgctcccttgcaacagcagtctccaaacgaggagatggat
tcctcagagctgggatctgtggagagggctgtggaacactttcagattgccactgctcag
ctcttccaagttgagcaaccgccacctccaccactgcctgcggaagaggaagaacggcca
gaacagccgcaaccgcctgccgaacacaaaacggagtctggagaatatgagcaatacggc
ctggagatgaccgtaatgccagaagctctggttcattatggcagtcaagatgagactgag
gtgccacaggtgactgaggatggcatggagctggaagaagcacccaaagagaccacacta
gaattaactgttcctttagagccagagcagccaagtgagttcgaaaaactcttcaaagca
tgcgagtacagcccagatgacttcaatggctgggtctacttgctgcagtttgtggaacaa
gagaatgacctgacagatgtgagaaactcgtttgatgcattcttcctgcgttatccttac
tgctatggctactggaagaagtatgctgatattgagaaaaaacacgagaatatacaggtt
gcagaagaggtgtacagaagaggcttgcaggccatccctctcagcgtggatctgtggctg
cattacctgacctacattaaagagaactcagacatgagtgacccagagaccgagggacgc
attagagcggcctttgaacacgccgtgctcgcagcaggcacagactttcgctcggaccgc
ctgtgggagtccttcatcaactgggagacggagctggagaaattggctaacgtcaccacc
atctatgaccgcatcttgggcatcccgacccagctgtattcccagcacttccagaggttc
aaagatcacgtgcagaacaacaaccccaagcacttcttgccggaagaggagtttgttcag
ctgcggctcgagctctctaaagacagcctattggccatgatcggcgaggtggaggatgcg
cctgctgcgcacgaagagttgccgcctggtacagacgatctggtggaccctgcaaagagg
gtgaccgagatcgagaacatgcgccacaaggtgatcgagattcggcaggaactgttcaac
cacaacgagcatgaagtcagcaagcgctgggccttcgaagaaggggtaaagagaccatac
ttccatgtcaaagccttagagaagacccagctgaacaactggaaggagtacctggacttt
gaaattgaaaatgggatccctgagcgcgtggttgttctttttgaacgatgcctcatcgct
tgtgctctctacgaagagttctggaccaagtatgcaaaatatctagagggccacagcacc
gatggtgtgagacatgtctacaagaaggcgtgcagcatccatatgcccaagaaacccacc
atccatctgctgtgggctgcttttgaggagcagcaggggaatgtcgaggaggcgcgtggc
atcctgaagtccctggaggaggccgtccccggactggccatggtgcgtctccggagggtc
agtcttgaacgtcgccacgggaacttggaggaggcggaggccctgttacaggaggccatg
gagtctgcgaagaatgctactgagacatcgttctatgctgtgaagctggccaggcagatg
atgaaggtgcagagaagtctgagcaaggccaggaaagtgctgctggacgccatcgaaaaa
gaccaggcgagtcccaaactcttcctgaacctgctggagctggaatacagcggggacgtg
ctgcagaacgaggcggcgatcttggcttgtttcgaccgcgccctgcagagccagatgccc
ctcgagtcccgccttcttttctgtcagcgcaaggtggagttcctcgaggactttggcagc
gacatcaatgtgctcgtggccacatatgaggaacaccagaacctacagaaagaaagcgaa
acttccaagaggaaggcggagaacgggtatgacagctctcaagagcccgatgccaagagg
cagcgcgtggaagacggcacctcggatgaagtcaacgcggcggccgacgctcaggccaac
aactctgcatacaacaactggtaccagcaacaatacggtggttggggacaaaactcctgg
ggacagtacaaccaatatgcccagtataaccagtactacccccctcccccaacataa |
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