Pseudoliparis swirei (Mariana hadal snailfish): 130202409
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Entry
130202409 CDS
T09868
Symbol
ppp2r5cb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', gamma b isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
pswi04110
Cell cycle
pswi04114
Oocyte meiosis
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130202409 (ppp2r5cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130202409 (ppp2r5cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130202409 (ppp2r5cb)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130202409 (ppp2r5cb)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130202409 (ppp2r5cb)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130202409 (ppp2r5cb)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130202409 (ppp2r5cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
130202409
NCBI-ProteinID:
XP_056283907
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All DBs
Position
12:5196771..5221587
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AA seq
578 aa
AA seq
DB search
MPNKTKKDKESQKSGKVGKSGGQDNSEHEQSSNRKGSNNVPPTTQLLKGKQPGAQSPVKK
DKRQSSSHFSLSNNRELQKLPAFKDVPPAEQEKLFIQKLRQCCVLFDFLSDPLSDLKWKE
VKRAAISEMVEYITHNRNVITEPIYPEVVHMFSVNMFRTLPPSSNPTGAEFDPEEDEPTL
EAAWPHLQLVYEFFLRFLESPDFQPNVAKKYIDQKFVMQLLDLFDSEDPRERDFLKTTLH
RIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFL
LKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPTVMALLKYWPKTHSPKEVMFLNE
LEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKLL
PIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKSKEKAKWKERE
ETWLKIENLAKSNPQFLIYVDSIISGCPVDMETDGPPLDDVNGLKKAVVEEATQVLKDQR
RERPLMRRKSELPRDICTVTALELHRRADEMLMTHDGH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaaacgaaaaaagacaaggagtcacagaagtctggcaaagtggggaagagt
ggaggacaagataattcagagcatgagcagagctctaacaggaagggcagcaataatgtt
cctcccaccacgcagctgctaaaggggaagcagccaggtgcccagtcacctgtcaaaaag
gacaagaggcagagctcctctcatttcagcttgagcaacaacagggagctgcagaaactg
ccggccttcaaagacgtcccccccgcggagcaggagaagctcttcatccagaagctgcgg
cagtgctgcgtcctcttcgatttcctctcggacccgctgagcgacctgaaatggaaggag
gtgaagcgggcggccatcagcgagatggtggagtacatcacccacaaccggaacgtcatc
accgagcccatctaccccgaggtggttcacatgttttctgtgaatatgttcaggacgttg
ccgccgtcgtccaaccccacgggcgccgagtttgacccggaggaggatgagcccacgctc
gaggctgcgtggcctcatctacagctcgtctatgaattcttcctgcggttcttggagtcg
cctgactttcaaccgaacgtagccaaaaagtatattgaccagaagtttgtaatgcagctc
ttagacctgtttgacagtgaagaccccagagaaagagattttttaaagaccactcttcat
cgcatctacggcaagttcctgggcctgcgagcgtacattaggaaacacattaataacata
ttttataggttcatttatgagactgaacatcataatggaatagcagaattactggaaata
ttaggcagcataatcaatgggtttgcattaccgctgaaagaagagcataagatcttcctg
ctgaaggttctgctgcctttgcacaaagtcaagtctcttagtgtgtaccacccacagctg
gcgtactgtgtggtccagttcctcgagaaggacagcacgctcacagaaccgacggtcatg
gctctgttaaagtattggccgaagacccacagtccaaaggaggtgatgttcctcaacgaa
ctggaggagatcctggacgtcattgagccttcagagttcgtcaaagtcatggagcctctg
ttcaggcagctggccaagtgcgtgtccagcccgcactttcaggtggcggagcgagcgctg
tactactggaacaacgagtacatcatgagcctcatcagtgacaacgccgccaagctcctg
cccatcatgttcccgtccctctaccgcaactccaagacccactggaacaagacgatccac
gggctgatctacaacgcgctgaagctcttcatggagatgaaccagaagctgtttgacgac
tgcacgcagcagttcagggcggagaaaagcaaagagaaagccaagtggaaagagagggaa
gagacgtggctgaagattgagaatcttgcaaaatcaaacccacagtttctgatttacgtc
gactcgataatctcgggttgtccggtggacatggagacagacgggccgccgctggacgac
gtcaacgggctgaagaaggccgtcgtggaggaagccacacaggtcctgaaggatcagcgc
cgggagcgcccgctgatgaggaggaaatcggagctccccagggacatctgcacggtcacg
gccttggagctgcaccggagagccgacgagatgctgatgacgcacgacggccactag
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