Pseudoliparis swirei (Mariana hadal snailfish): 130202413
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Entry
130202413 CDS
T09868
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130202413
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130202413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
130202413
NCBI-ProteinID:
XP_056283916
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Position
12:complement(10675859..10683512)
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AA seq
927 aa
AA seq
DB search
MGVHDLWSIVEPVRESVPLYSLSGMTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNIFFRA
SSLTLMGVKLVFVMEGEAPKLKAETMSKRTETRYGGFKKASAPKTTINTSRGRFKAVLRE
CADMLDYLGMPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGAQTVYRNFNMNSKD
PQVDCYRTSRVQTELHLSRENLVGLAILLGCDYIPKGVLGVGKEQTLRLIQMLKGQTLLQ
RFMQWKEENAGVFEGVKKVPHCNICRHPGSAKAHERGGCLLCDSKRFCQPQDFDYRCPCD
WHHYEQARQELSFEANIRKKTLANQQFPFTEIICEFLISKDKPVSHFKRRQPNMLMIQKF
ANDKMEWPKHYTSEKVLVLITYAEMMNRKYGREMSSQIKPLRILKPRVRNAVACFEVVWS
APEHFVFPEDRPAEDQQEVRTVEEESLFRVAYPEVVESYLRDKALAEENKNKKKRPKSKK
EKPSEVSDGISDLLAQMTLQSSSNTNAQTLIHAISDTDEPEVVVLDSPVNHKKDLKSKED
DRNLGGCPSTPLSPAKSEAAASLSVSAVIDALHLSDIDWDALSFSSSPTQQSAANHNTEP
KLSKATDGDVRETKAENAKQKTSGEVKEDDSSAPELCYTDCPLRDRLLMRNTAKVVNQMG
AHNDVVSKQLNYELASFKHITSHNSKLNGQIPSNGSCELSGKESAVDKKEPLMDKRQWAT
SNGETNTRSAKHQLGPAAQVKTKDRCNYSQKPPEKYTFVQKAISSSAVAPQRSHSDPGQR
DKDQKRPQAAKKSVCMSMCSSSEESDAENQQSGPQRKTQIKPMNKITDSFRSGFPLKHKR
VQPAAKMAQAVQLLQLKAQRCSPDIEINDIPLSTKSRCQDISAAEVDGGVFFQTPASPVV
VLDSDDSAIFSESPLPLAERLRLKFLK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgacttgtggtccatcgtggagccggttcgtgagtcggtgccgctgtac
agtttgagcggaatgactctggcagtggacctgagtttatgggtgtgcgaggcccagcat
gtccaagcgatgatggggagagttaccaagccccacctgaggaatatatttttcagggcg
tcatccctcacccttatgggagtaaagctggtctttgtgatggaaggagaagcccctaaa
ctgaaagcagaaaccatgagcaagaggacagaaacaagatacggaggattcaaaaaggct
tctgccccgaagactacaataaacaccagcagagggcgctttaaagctgtactccgagag
tgtgcagacatgttggactatctgggtatgccctgggtgacagctgctggggaggctgag
gccatgtgtgcctacctggactcccagggcctggtggacggatgcatcactaacgacgga
gatgccttcttgtatggagctcagactgtctacaggaacttcaacatgaacagtaaagac
ccacaggtggactgttacaggacatccagggtccaaacagagttgcatctttccagagag
aatctagtgggtctggccatcctccttggctgcgattatattcctaaaggcgttctaggt
gttggtaaagagcaaactctgaggcttatccagatgctgaaaggacaaacacttctgcag
aggtttatgcagtggaaggaggagaatgcaggtgtgtttgagggagtaaagaaggttcct
cactgcaacatatgtcgacatcctggctcagcgaaggcgcatgaacgtggcggctgtttg
ctttgcgacagcaaacgtttctgtcaacctcaggactttgactaccggtgtccttgtgac
tggcaccactatgaacaggcccggcaggaattgtcttttgaggcaaatatcagaaagaaa
acactggcaaatcaacagttccctttcacagagatcatttgtgagtttctgatttcaaag
gataagcctgtgtcacattttaagaggaggcagccaaatatgctgatgatacagaaattt
gccaatgacaagatggagtggccgaagcattacaccagtgaaaaggttttagtcctgatc
acctatgcagagatgatgaacagaaaatatggaagagaaatgtcctcccaaatcaagccc
ctcagaatattgaaaccacgggtgaggaatgccgtcgcttgcttcgaggtcgtctggagc
gcaccagaacatttcgtgtttcctgaggatcggcctgcagaggatcaacaggaagtgagg
acggtggaggaagagtctctcttccgtgtggcctacccagaggtggtggagagctacctg
agagacaaagctttggccgaagagaacaaaaacaagaagaaaaggccaaagagtaaaaag
gagaagccatctgaggtctccgatggtatttcagacctcttggcccagatgacccttcag
agttcctctaacacaaacgcacaaacgctgatccatgccatttcagacacggatgaacca
gaagtggtggttttggacagtccggttaaccataaaaaggatctgaagtcaaaagaagat
gaccgtaatctcggcggttgccccagtactcctctgtctccggccaaatcagaggctgct
gcttcattgtctgtctctgctgttatcgatgctctacacctgagtgatattgactgggat
gccttgtccttctcatcttctccaactcaacaatcggctgcaaaccataacactgagccc
aaactgagcaaagccacagacggtgatgtcagggaaacaaaggctgaaaacgcaaagcag
aaaacctcaggtgaggtcaaagaagacgactcctcagctccggagttgtgctacacagac
tgtcctctgagggaccggctgctcatgaggaacacagcgaaggttgtgaaccagatgggg
gcacacaatgacgtggtctcaaaacaactcaactatgagttggcttctttcaaacacatt
acttctcataactcaaaactaaatggccagatccccagtaatggtagttgtgaattatca
ggaaaggaatctgctgttgacaaaaaagagccactgatggacaaaaggcagtgggcaacg
agtaatggcgaaacaaacactcgcagcgcaaaacatcagttgggccctgcagctcaggtt
aagacaaaggacagatgtaattactcccaaaagcctcctgagaaatatacatttgtccaa
aaagccatttcatcatctgctgtcgcaccacagaggagccactctgacccaggtcaacgg
gacaaggaccagaagaggccacaggccgccaagaagagcgtgtgtatgagcatgtgttca
tcgagcgaggaaagtgatgcagagaaccagcagtctggacctcaaagaaagactcaaatc
aagcccatgaacaagattacggacagctttcgctcaggctttcccttgaaacataaaaga
gtccaaccagcagcgaaaatggctcaagctgttcagctactacaactaaaagctcagcgc
tgcagtccagatatcgagataaacgacatacctttatcaacgaaaagcagatgccaggat
atctcagcagctgaagtggatggcggggtgttctttcagactccagcatcacctgtcgtt
gtgttagacagcgatgactcggctatttttagtgagagtccattgccactggcagagaga
ctgcggctgaaattcctgaagtga
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