Pseudoliparis swirei (Mariana hadal snailfish): 130202455
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Entry
130202455 CDS
T09868
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03410
Base excision repair
pswi04210
Apoptosis
pswi04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130202455 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130202455 (parp1)
04217 Necroptosis
130202455 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130202455 (parp1)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130202455 (parp1)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130202455 (parp1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
130202455 (parp1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130202455 (parp1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130202455 (parp1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130202455 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
130202455
NCBI-ProteinID:
XP_056283978
LinkDB
All DBs
Position
12:9111750..9122988
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSQEDKMYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQLTADISGYSDLRWEDQEKVQKAIEGGGATGGKGDQKSGAKGQKILNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKSVDAEKPQLGLIDRWYHTACFVSSREELVFKPEYNAAQ
LKGFNALRAEDKEELKKRLPVVKTEGKRTTDEVDGPSKKQKKEEEAEKKKLDEQLKIQSQ
LIWGIKDKLKKFCSTNDMKELLIANDQEVPSGESNVVDCLADGMAFGALEACTECTGQVV
CKGDAYYCSGDISAWTKCVLKTTTPKRRDWVTPKEFHEVPFLKKFKFKRQDRVYPKEAPT
QTLAKVKAEPLASASSAPTERLPEGAPADKPLTGLKLLTVGKLSKNKDDLKTAVEEMGGK
ISTTANKASLCLSTKKEVEKMSKKMEEVRDAGVRVVSEDLLTDIKSSGKSLQELVSLHAI
SPWGAEVKVEAQASSVASKSGALATKSTGRVKEEEGGSKSKKMKLTVKGGAAVDPDSGLE
NSAHVLEQGGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LEKFNDKNSALDNFLSVYKEKTGNIWSASNFTKYPNKFYPLEIDYGQDEEAVKRLTASAG
TKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQQAV
SDSQAEAQILDLSNRFYTLIPHDFGMKKPPLLNSLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNESDPIDINYEKLKTKIEVVDKTTAEAEIIMQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRYRPFEELHNRQLLWHGSRATNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPAGLLLLAEVALGNMHELKKASHISKLPKGKHSVKGLGRSAPDPSA
SVTLDGVQVPLGKGANTNIDDTSLLYNEYIVYDVAQIYMKYLVKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcaagaggacaagatgtacaaagcggaatatgccaaaagcggccgcgca
tcgtgcaagaaatgcaaggaaaacatagcgaaagactcgctgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttctcttgcttctggctg
cgagcagcagctcagttgaccgcggatatttctgggtattctgacctccgctgggaggac
caggagaaggtacaaaaggccatcgaaggtgggggagcaacaggaggaaaaggggaccag
aagagtggagctaaaggacagaagatactgaatgactttgcggtggaatatgccaagtcg
aaccgcagcacatgcaaaggctgtgatcagaaaatagaaaaggatcagatacgggtctcc
aagaaatctgtggacgcagagaagccccaactgggcctgatcgaccgctggtatcacaca
gcgtgttttgtgagcagcagggaggaactggtcttcaagcctgaatacaatgccgcgcag
ctgaagggtttcaacgcactgcgggcagaagacaaggaggaactgaagaagaggctccct
gtcgttaaaactgaagggaagcgtacaactgacgaggtggatggaccatctaagaaacaa
aagaaagaggaagaggctgagaagaagaagctggatgagcagctgaagatccaaagtcag
ctaatttggggtatcaaggacaagctgaagaagttctgttcaaccaatgatatgaaggag
cttctgattgcaaatgaccaagaagttccctccggagaatcaaatgtggtggactgcctg
gctgacggcatggcttttggtgctcttgaggcctgtactgagtgcacgggccaggtggtg
tgtaagggcgatgcatattattgttcaggggacatctcagcctggactaagtgtgtgttg
aagaccacaacacccaaacgcagagactgggtcactcccaaggaattccacgaagttccc
ttcctgaagaaattcaagttcaagcgccaggacagagtttacccgaaggaggctccgacc
caaacgctcgccaaagtcaaagcagaacccttggcgagtgcatccagtgccccgactgag
cgactgccagagggagcccctgcagacaaacctctgactggtttgaagctgttgactgtg
ggcaagctcagcaagaacaaggatgatctcaagactgctgtggaggagatgggcggaaag
atttccaccacagccaataaggcctctctctgcctcagcaccaaaaaggaggtggagaag
atgagtaagaaaatggaggaagtcagggacgccggcgtgcgcgtggtctccgaggatctc
ctcacagacatcaagtcgtcgggtaaatccctccaggaactggtctccctgcacgccatt
tcaccctggggtgcagaggtcaaggtcgaggcacaagcttcgtctgtagcctctaagtct
ggagcgttggcgaccaagagcacaggcagggtgaaggaggaggaaggtggtagcaaatcc
aagaagatgaaactcacagtcaaaggaggagctgctgtggatccggattcaggtttggag
aacagcgctcatgtgttggagcagggcgggaagatgtacagcgctacgctgggccttgtg
gacatcgtcagaggaacaaactcctactacaaactgcagctgctggaggatgacgtacag
aaacgatactgggtgttcaggtcatggggaagagtgggcacgaccatcggaggcaacaag
ctggaaaagtttaacgacaaaaactctgcactggacaacttcctgagtgtttacaaagag
aagacgggcaacatctggagcgcctccaacttcaccaaatatcccaacaagttctacccc
ctggagatcgactatggacaggacgaagaagcagtgaagaggctgaccgcctccgccggc
accaagtccaagctggccaagcccgtgcaggagctgatcaagatgatctttgacgtagag
agcatgaagaaggccatggtagagttcgagattgacctccagaagatgcccctcggaaag
ctgagtaagaggcagatccagagtgcctattctctcctcactgaagtacagcaggctgtg
tcagactctcaggccgaggcccagatcctggatctctccaatcgcttctacaccctgata
cctcacgactttggcatgaagaaacctccactgctcaacagcctggactacattcaagct
aaagttcagatgttggacaacctgttggacattgaagtggcctacagcctgctgagggga
ggggcccaggacaatgagagcgatcccattgacatcaactatgagaaactcaaaaccaag
attgaggttgttgacaagactacagctgaggctgagatcattatgcaatatgttaagaac
acccacgctgctacacacaacacttacacgcttgaagtgcaagagatcttcaaaatagtt
cgagagggagagcgccaacggtaccgtcccttcgaggagctgcacaatcggcagctactg
tggcacggttctcgcgccaccaactacgctggtatcatgtctcagggtcttcgcattgcc
cctcccgaagccccagtgactggttacatgttcggtaaaggtgtgtactttgccgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccctgcaggcctcctactg
ctggccgaggttgccctcggcaacatgcatgaattgaagaaggcgtcacacatttcaaaa
ttacctaagggaaagcacagcgttaaaggtttgggcagatctgctcctgatccaagtgca
tctgtcactttggatggggtgcaagtgcctctggggaaaggagccaacactaacattgat
gacacaagtctcctgtacaacgagtacattgtgtatgatgtggcccaaatatacatgaag
tatctcgtgaagatcaagtttaactaccagacgtccctgtggtga
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