Pseudoliparis swirei (Mariana hadal snailfish): 130202487
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Entry
130202487 CDS
T09868
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
130202487 (gpcpd1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
130202487 (gpcpd1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
TreTu_C
Motif
Other DBs
NCBI-GeneID:
130202487
NCBI-ProteinID:
XP_056284047
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All DBs
Position
12:complement(3992810..4007746)
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AA seq
690 aa
AA seq
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METAQVTFIVRGETSPGEVIAIVGGCEALGSWHYQNATILHYDGNTWTTTVSVPIGAVSK
YRYLKGFFLQSKNSTRGTDIWGLSAGGPCQVIVNMWETHQQPRMMSPTASHQTIDDGQFG
IHNGVNCVDSGWLTCQTEIRLRLHHSRMPPVSITKKKYKRSRFRIKLTLEGLEEEEEDED
VEDGGVPGPVSVHKETTTLEISMISANGYKSRHSQPECGYALEPSQWTEYSIHSMDPYNL
ELTFEFFEEDMSVHVVQGDGLPGYVGTACLLSSSFSESGRDQGVSTLPIMGRNSRQTIGK
VRVDYLVITPIQGLQCDMSSSFTKYWKKRSTLNVGHRGAGSTHAAKHQRVRENTIASFKR
AANHGAAYVEFDVHLSKDAVPIVYHDLTCCISTKKKNDKKSLELIEVPVKDLTFDQLQLL
KLVHATATKESDDDDLMDEEEEIDEHQPFPSLSQIFQAIPEHVGFNIELKWICQMKDGSW
DGKLSSYFNMNAFLDTILSCILLKGGDRRIVFSCFDPDICTMVRRKQNKYPILFLTQGIS
ENYSELMDIRCQTTQIAISFAQSENILGISGHAEELLKNLSYIGDAQSKGLVVFSWGDDN
NEHEIRRKLREQGIDGIIYDSICEEQGEQNIFQVEEQHTLQEVITDETRKSSSCSCYSIP
CSTMLCGAAMDRNGSVESGSVESDSGLSSS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcacaggtgactttcatcgtcagaggcgaaacatccccaggagaggtgatt
gcaattgttggtggctgtgaggccctggggagctggcactatcaaaatgccacgatttta
cactatgatggaaacacatggacgaccaccgtctctgtgcctataggagctgtgtccaag
taccgctacctcaaaggattcttcctgcagtcaaagaattcaaccagggggactgacata
tggggattgagtgcagggggtccctgtcaagtgatagtcaatatgtgggagacccatcaa
cagccccgcatgatgagccccacagcgtcacaccaaactattgacgacggccaatttgga
attcacaatggggtgaactgtgttgactctgggtggctcacatgccagacagagatccgc
ctgcgcctgcatcattctaggatgccgccggtgtccatcactaagaagaaatacaagagg
tctcggttcagaatcaagctgacactagaaggattagaggaggaagaggaggatgaggac
gtggaggatggaggtgtgcccggtcccgtgtccgtgcacaaggagaccaccacgctggag
atcagcatgatcagtgccaacggctacaagtcccgccactctcagcccgagtgtggctac
gcgctggagccctcccagtggaccgagtacagcatccacagcatggacccgtacaacctg
gagctcacctttgagttctttgaggaggacatgagcgtgcacgtggtccagggtgacggt
ctcccgggttacgtgggcacggcctgcctcctctcctcctctttctccgagagcgggagg
gaccaaggagtttccacgcttcccatcatggggcgaaattcgagacagaccatcgggaaa
gtccgagtggactacctggtgatcacgccaatccaagggctgcaatgtgacatgagctcc
tccttcaccaagtactggaagaaaagaagtactctgaatgtgggtcaccgaggcgccggg
agcacgcatgcagccaagcaccaaagagtcagggagaacaccatcgcctcattcaaaagg
gccgccaaccacggggcggcctacgtcgagtttgatgttcacctctccaaggacgccgtt
cccattgtttaccacgatctgacgtgctgcatatccacaaagaagaaaaatgacaagaag
tctctggagctcatcgaggtgccagtcaaagacttgacgtttgaccagctgcagcttctc
aagctggtccacgccactgccaccaaagaaagtgatgacgacgatctgatggacgaggag
gaggaaatcgacgagcatcagccgttcccgtctctgtcgcagatctttcaagccattccc
gagcacgtgggcttcaacatcgagctcaaatggatctgccagatgaaggacgggtcgtgg
gacggcaaactatcgtcctacttcaacatgaacgccttcctcgacaccatcctgtcctgc
attctgctaaaaggaggagacagacgcatcgtcttctcctgcttcgatcccgatatctgc
accatggtgcgtcgaaagcagaacaagtaccccatcctcttcctcactcaggggatttca
gagaactactctgagctgatggacatccgctgccagaccactcagatcgccataagtttc
gcccagagtgagaatattctgggcatcagcggccacgccgaggagctgctgaagaacctg
tcctacatcggggacgcccagtccaaaggcctggtggtgttcagctggggagacgacaac
aacgagcacgagatccggcggaagctgcgggagcagggcatcgacgggatcatctacgac
agcatctgtgaggagcaaggcgagcagaacatcttccaggtggaggagcagcacaccctg
caggaggtgatcaccgacgagacccgcaagagctcctcctgctcctgctactccatcccc
tgctccacgatgctctgcggcgccgccatggaccgcaacggcagcgtggagtccggcagc
gtggagtccgactccggcctcagctcctcgtga
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