Pseudoliparis swirei (Mariana hadal snailfish): 130202583
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Entry
130202583 CDS
T09868
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130202583
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130202583
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130202583
NCBI-ProteinID:
XP_056284224
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All DBs
Position
12:10047348..10052141
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AA seq
746 aa
AA seq
DB search
MEEDHVHCMSCVNQRCMVRPQPGISCDLITCPLVCGAVFHSCKVDEHHLLCALLRVPCLN
SGYGCPAALVRNQMYAHLEVCPAGVVCCTMEWNRWPVSCLDYTSYESLSRGVEEVEQLDM
ALALQDQRTLLESLKVIAMTPTAEGEALSPPREDNRTTDSSLLPSAPEASAMTESPSRAP
SSRQPRPPPPGSAKERIVSGINGLTEEHFSKLYEATVETARSLSAALDFVSRAQPVDGSD
ERIERRSSDDGDLRSGPGGLKRKETEGQRVCSSCLRGDGAVAGADVKTLKTTDGALSGGT
EACLETARPVEVKGDMSAGVSQEAAPPPPRTSPVPVSQGAAQRAAHVVLEDRGLVLLGNH
GPERKFYNYNLFRGPGRCPLPNGRVGFIPDRSAFRLRPKMEDKAVDTSDLEPADDPMGLG
EIDLITAALLFCLEDFRECRRISDAIYVDGYRVDFGTQTFTFPAAILVTGTRVGEIASAS
ACDHAAPQLSYPSPFRTLRLGLVLEALEVEAVPHNRYLPPNPRYRHMFPFVCGQALRRDQ
FSSHFTNVHGDIHAGLNGWMEHRCPLAYYGCTFSQRRFYPSTEGAKVVHDRHLRAFGVQP
RPRATFPSDFQSDQISGLPIEILWHVAGFLDSFSLCQLSLVSRTMREVCASLLQTRGIVE
LRWERRRRPGAPGAVSWQIKNRVWSFSTAFSPVLSWGFTDLPSMSNHLKKCHFNNVEHKT
EPVPLPAMCTARDGHSLRRVLRHVNT
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccacgtccactgcatgtcctgtgttaatcagagatgcatggtcagacct
caaccaggcatctcttgtgatcttatcacctgtcctctggtgtgcggggcggtgtttcac
tcctgcaaagttgatgagcaccatcttctgtgtgccctgctgagggtgccctgcctgaac
agtggctatggctgccctgccgccctggttcgcaaccaaatgtacgcgcaccttgaagtg
tgtccggctggagtggtgtgctgcacgatggagtggaacagatggcccgttagctgcctg
gactacacttcctatgagagcctgagccgtggggtggaggaggtggagcagctggatatg
gcacttgctcttcaggaccagcgtacgctcctcgagtccctcaaggtgatcgccatgact
ccgactgcagaaggagaagcactttccccgcctcgtgaggacaacaggacaacggactca
tctttgcttccatcggcccccgaggcctccgccatgacggagtccccttcgcgggcgccg
tcctcacgtcagccgcgaccgcccccgccaggctcggcgaaggagagaattgtcagtgga
ataaatggcttgaccgaggagcacttcagtaaactctacgaggccacggtggagacggcg
agaagcttatccgccgctttggactttgtgagccgagcgcagccggtcgacggcagcgac
gagcgcatcgagaggcggtcgagcgacgacggagaccttcggagtggacccggcggtttg
aagagaaaagagacggaggggcaacgcgtttgttcgagctgtttgagaggagatggggct
gtggcgggagccgacgtgaagactttaaagacaacagatggagcgctgtcaggaggcacg
gaggcctgtcttgagacggcccgcccggtggaggtgaaaggtgacatgagtgctggtgtt
tctcaggaggcggcccccccccccccgaggacgtctccagtgcccgtcagccagggtgcg
gcgcagcgggccgctcatgtggtcctggaagacagggggctcgttcttttgggaaaccac
gggcccgagcgaaagttctacaactacaatttgtttcggggtcctggccgatgtccgtta
cccaacgggcgggttggtttcatcccagacaggtctgcgtttagattacgacccaaaatg
gaagacaaggcggtcgacacttcggatctggagccggcggacgaccccatgggcctcgga
gagattgatctgatcacggcggcgctgctcttctgtttggaggatttcagagagtgtcga
aggatctccgacgcgatctacgtcgacggctaccgcgtggactttggcacccagacgttc
acgttccccgcggccatcttggtgaccggcaccagagtgggtgagattgcgtccgcgtct
gcctgcgaccacgccgccccgcagctctcctacccgagcccctttcgcacgctccgcctc
gggctcgtcctggaagctctggaggtggaggcggtgccgcacaaccgctacctccccccc
aacccccgctaccggcacatgttcccgttcgtctgcggtcaggcgctgcgtcgggaccag
ttctcttcccatttcacaaatgtccacggggacatccacgccggtctcaacggttggatg
gagcaccgctgccccctggcgtattacggttgcacattttctcagcggaggttttacccg
tcgaccgagggggccaaagtggttcatgacaggcacctcagggccttcggggtgcagcct
cgcccgcgggcaacatttccaagtgatttccagtccgaccaaatcagcgggcttccgatt
gagatcttgtggcacgtggctggattcctggacagcttcagcctctgccagctgtccctg
gtgtcacggacgatgagggaggtgtgtgccagtctcctccagaccaggggcatcgtggag
ctgcggtgggagcggaggcgacggcccggtgcccccggcgctgtgtcgtggcagatcaaa
aacagagtgtggagcttcagcactgctttcagcccggtgttgtcttggggtttcaccgat
ctccccagcatgtcgaaccatcttaagaagtgccacttcaacaacgtggagcacaagacg
gagccggtgccccttcctgccatgtgcactgcccgagatggacactcgctgcgtcgcgtc
ctccgtcacgtcaacacctga
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