Pseudoliparis swirei (Mariana hadal snailfish): 130202601
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Entry
130202601 CDS
T09868
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04020
Calcium signaling pathway
pswi04070
Phosphatidylinositol signaling system
pswi04081
Hormone signaling
pswi04082
Neuroactive ligand signaling
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04270
Vascular smooth muscle contraction
pswi04310
Wnt signaling pathway
pswi04371
Apelin signaling pathway
pswi04540
Gap junction
pswi04621
NOD-like receptor signaling pathway
pswi04912
GnRH signaling pathway
pswi04916
Melanogenesis
Module
pswi_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130202601
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130202601
04371 Apelin signaling pathway
130202601
04020 Calcium signaling pathway
130202601
04070 Phosphatidylinositol signaling system
130202601
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130202601
04081 Hormone signaling
130202601
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
130202601
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130202601
09152 Endocrine system
04912 GnRH signaling pathway
130202601
04916 Melanogenesis
130202601
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130202601
04270 Vascular smooth muscle contraction
130202601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130202601
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
130202601
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130202601
Endocytosis
Macropinocytosis
Phospholipase C
130202601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
C2
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
130202601
NCBI-ProteinID:
XP_056284245
LinkDB
All DBs
Position
12:4261277..4328333
Genome browser
AA seq
1239 aa
AA seq
DB search
MTKSYEFNWQKHLPEFMQEGASFDRFDEDPYVFEPNCQMRVDEYGFFICWKGDGKEGQVL
ECSLINSIRVGAVPKDPKILSSFESLRKTEADLEGCIICICSGTDLVNLNFVFMLAENPD
TARNWIEGLRAVIHNFKANNVCPMTCLKKHWMRMCFLTNVNGKIPVRGITRTFASGKTEK
GIFQALGDLGLPSGKNDEIEPSDFTYAIFYALTQKICPRTDIEELFKNINGNKTDYLTVD
QLVSFLNENQRDPRLNEILFPFYDPKRAMQIIEKYERDEELKKKGCMSSDGFCRYLMSDE
NAPVYLDRLELYQEMEQPLAHYFISSSHNTYLNGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSDYPVILSFENHCSKPQQYKM
AKYCEETFGDFLLKQPLENYPIESGRPLPSPNDLRRKILIKNKRLKPEVEQKQLEAFKKH
MEAGETNTPAIIMGEETEEDTENGPLREKDAEEKDVNSVAPSSPSEATTETEASRVSQSN
NAVTHNNNNSIKKAPDDDATETSEATEATTDVSEASEQDNSKKAVEEPEDSEEALIAQYT
YVGGTTNIHPWLSAMVNYAQPVKFQSFDVAEERNIHHNMSSFNESVGLGYLKTNAIEFVN
YNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNQGKFEYNGSCGY
LLKPDFMRRSDRTFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEVDMYGLPTDT
IRKEFRTRMVMNNGLNPAYNEEPFVFRKVILPDLAVLRIGVYDDNNKLIGQRLLPLDGLQ
AGYRHISLRNEGNKPLSLPTIFCQIILKTYVPDGFGAIVDALSDPKKFLTIAEKRLDQMK
ALGFDTNDIADVPSGSSKSDKKGKGRGDTVKASVTSQASSDMAAASSAAQSNAAEAKKDN
ALVPNVSIEDLKLMKTYLKLMKKQQKELSTLKKNQSKDQSTMQKVHCSQVDKLVTQHEKE
KLSQEKLLEKAVKKRGENNCQELKKETEDKSQTLTADHKVKVKEITAQHTKEWSELVSSH
GGEEQELKDGHVAQQGEHLKKLLTSVQEQQALQLKGIHERQSKEMRANQAKMSMENSKAI
SQDKSIKNKAERERRVRELNSSNTKKFLDERKRLAMKHQKEMEQLEKNQRVQLEKLEKVN
EQYLKSHHANKHLQGQRHAADGEDGGSDGPQTSHGGVSE
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcctacgagttcaactggcagaagcatttgcccgagttcatgcaggagggc
gcctccttcgacaggtttgacgaggacccgtacgtctttgagcccaactgtcagatgagg
gtggacgagtacggctttttcatctgctggaagggtgacggaaaggagggccaggtcctc
gagtgttccctcatcaacagcatccgcgttggcgccgtcccaaaggaccccaagatcttg
tcgtcgttcgagtccctcaggaagacggaggccgacttggagggctgcatcatctgcatc
tgcagcggcacggacctggtcaacctcaacttcgtcttcatgttggcggagaaccccgac
acggcccggaattggatcgagggtctgcgcgccgtgattcacaactttaaggccaacaac
gtgtgtccaatgacctgcctcaagaaacattggatgaggatgtgcttcctgaccaatgtg
aatgggaagattcctgtgagaggcatcactcgaacttttgcttccggaaaaacggagaag
gggatcttccaggctctgggggacctcggccttccgagcggaaagaacgacgagatcgaa
ccgtccgatttcacctacgccatcttctacgcgctcacgcagaagatctgccctcgcacc
gacatcgaggaactcttcaagaacatcaatgggaacaaaactgattatttaactgtagac
cagttagtcagctttctgaatgaaaaccagcgcgacccgaggttaaatgagatcctgttc
ccgttctacgaccccaagagagccatgcagatcatcgagaagtacgagagggatgaagag
ctgaagaagaaaggctgcatgtccagtgacgggttctgccggtacctgatgtcggacgag
aacgctccggtttacctggaccggctagagctgtaccaggaaatggaacagccgctggcc
cactacttcataagctcctcccacaacacgtacctgaacggccgacagtttggaggaaag
tcttcggtggagatgtaccggcaggtcctgctgtccggctgcagatgtgtggagctggac
tgctgggatgggaaaggagaggaccaggagcccatcatcactcatggcaaggccatgtgc
acagacatcctgttcaaggatgttatccaagccatcaaagagacggcgttcgtgacctca
gactatcctgttattctgtcctttgaaaaccattgcagtaaaccacagcagtacaagatg
gccaagtattgtgaggagaccttcggggacttcctcctcaaacagcctctggaaaactac
ccgattgagtcggggcgccccttaccgtctccaaacgacctcagacgcaaaatcctcatc
aaaaacaaacgcttgaaacctgaagttgaacagaagcagctcgaggcctttaagaaacac
atggaggccggagagaccaacacccccgccatcattatgggagaggagactgaagaggac
acagagaacggtccgctaagagagaaggatgctgaggagaaggatgtgaattcagtggcc
cccagcagtccgtcagaggcgaccacagagaccgaggccagccgtgtttcccagagtaac
aacgcggtaacgcacaacaacaacaacagcatcaagaaggcgcccgacgacgacgccacc
gagacgtcggaagccacggaagcgacgacggacgtctcggaagcatccgagcaagacaac
agcaagaaggccgtggaggagccggaggactctgaagaggctctgatagctcagtacacg
tacgtaggaggcaccaccaacatccacccgtggctctcggcgatggtcaactacgcccag
cccgtcaagttccagagctttgacgtggcagaggagcggaacatccaccacaacatgtcc
tccttcaacgagtcggtcgggctgggctatctgaagaccaacgccatcgagttcgtcaac
tacaacaagcgtcagatgagccgtatctaccccaaagggggccgggtggactccagtaat
tacatgcctcagatcttctggaacgcaggctgccagatggtctcgctcaacttccagacc
ccagatctggccatgcagctgaaccaggggaagttcgaatacaacggctcctgcgggtac
ctgctgaagcccgacttcatgcggcggtcagacaggacgtttgacccgttctcagagacg
cccgtggacggagtcatcgctgcgacctgcagcgtgcaggtgttctctggacagttcctg
tcggacaagaagatcggcacgtacgtggaggtggacatgtacgggctgcccaccgacacc
atccgcaaggagttccgcacgcgcatggtgatgaacaacggcctgaaccccgcctacaac
gaggagccctttgtgttcagaaaggtgatcctcccggacttggcggtgctgcgcatcggc
gtctacgacgacaacaacaagctgattggccagcgcctgctgcccctcgacggcctgcag
gccggctaccgccacatctctctgaggaacgagggcaacaagccgctgtcgctgcccacc
atcttctgccagatcatcctgaagacctacgtgcccgacggcttcggcgccatagtggac
gctctgtcggacccaaagaagttcttgaccatcgcagaaaagcgactcgaccagatgaag
gcgttggggttcgacacgaacgacatcgcggatgttcccagcgggagctcaaagagcgac
aagaagggcaaaggtcgaggagacacggtgaaggccagcgtgacgtcacaggccagctcc
gacatggccgcggcctccagcgccgcccagagcaacgcggcggaggccaagaaggataac
gctctggtgcccaacgtcagcatcgaggacctcaagctcatgaagacgtacctcaaactg
atgaagaagcaacagaaggagctcagcactttgaagaagaatcagtccaaggatcagagc
acgatgcagaaggtccactgcagccaggtggacaagctggtcactcagcacgagaaggag
aagctcagccaggagaaactgttggagaaagccgtgaagaaaagaggggaaaacaactgc
caagagctcaagaaggaaaccgaggacaagagccagactctgaccgccgaccacaaagtc
aaggtgaaggagatcacggctcagcacaccaaggagtggtccgagctggtcagcagccac
ggcggcgaggagcaggagctgaaggacggacacgtcgcgcagcagggcgagcacctcaag
aagctgctgaccagcgtccaggagcagcaggcgctgcagcttaagggcatccacgagcgg
cagagcaaagagatgcgcgccaaccaggccaagatgtccatggagaacagtaaagccatc
agccaggacaagtccatcaagaacaaggcagagagagagaggagagtacgagagttaaac
agcagcaacaccaagaagttcctggatgagaggaagcggctggccatgaagcatcagaag
gagatggagcagctggagaagaaccagcgagtccagttggagaagctggagaaggtcaac
gagcagtatttgaaatcacaccatgcaaacaaacatcttcaaggccagagacatgcagca
gatggcgaagatggaggaagcgatggaccgcagaccagccacggtggtgtgagcgaatga
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integrated database retrieval system
