Pseudoliparis swirei (Mariana hadal snailfish): 130202605
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Entry
130202605 CDS
T09868
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04020
Calcium signaling pathway
pswi04070
Phosphatidylinositol signaling system
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04270
Vascular smooth muscle contraction
pswi04310
Wnt signaling pathway
pswi04371
Apelin signaling pathway
pswi04540
Gap junction
pswi04621
NOD-like receptor signaling pathway
pswi04912
GnRH signaling pathway
pswi04916
Melanogenesis
Module
pswi_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130202605
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130202605
04371 Apelin signaling pathway
130202605
04020 Calcium signaling pathway
130202605
04070 Phosphatidylinositol signaling system
130202605
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
130202605
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130202605
09152 Endocrine system
04912 GnRH signaling pathway
130202605
04916 Melanogenesis
130202605
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130202605
04270 Vascular smooth muscle contraction
130202605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130202605
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
130202605
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130202605
Endocytosis
Macropinocytosis
Phospholipase C
130202605
BRITE hierarchy
Motif
Pfam:
PI-PLC-X
PH_14
PLC-beta_C
PI-PLC-Y
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
130202605
NCBI-ProteinID:
XP_056284255
LinkDB
All DBs
Position
12:4138430..4258770
Genome browser
AA seq
1241 aa
AA seq
DB search
MAGAQPGVHALQLEPVSVPESLRRGNTFLKWDDDSTTVTPVTLTVDPNGYFLYWTDQNKE
TDLLDISYIKDARNGKCTKTPKEAKLRELLDVSTLAGKMENRMLTVVSGLDMVNITYLNF
MAFQEETAKEWAEELFNLASNLLVQNMSREDCLEKAYTRLKLQLNPEGRIPVKNIFRMFS
ADRKRVETALENCNLPSVRSDSIPLEDFTPEVYSLFLGNICPRTELDHIFSDISERARPS
LSVEQLTEFINNKQRDPRLNEILYPPLKAEQVQLLVDKYEADASLAQRGQISVEGFARYL
DGEENSIMPPEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGSSSVEMYKQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPIILSFENHVDSPK
QQAKMAEYCRSIFGDALLTEPLEKYSLESGVPLPSPMELMGKILVKNKKKHHKADGSAKK
KLSEQVSNTYSDSSSVCEPSSPSTGSTKEEMADSSQTPDGAELSLRPQGRKSIGEVEAES
EDEDDDDDDCKKGSMDEGTAGSEAFATEEMSNLVTYIQPVKFNSFEASKKINRSYQMSSF
VETKALEQLTKCPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQTID
LSMQLNLGMYEYNGKCGFRLKPEFMRRPDKHFDPFTESTVDGIVANTLSVKIISGQFLSD
KKVGTYVEIDMFGLPVDTKRKAFKTRTSPSNAINPVWEEEAIVFKKVVLPTLASLRIAVF
EEGGKFIGHRIIPVSAIRPGYHYISLRNEKNQALTLPTLFVYVEVKDYVPDTFADVIEAL
SNPIRYVNLMEQRANQLAALTLEEGGEEEGDKEAEAGSDAPSESKVDPRATLPAENGLSY
TAIIAPKPPALVGHQPQSAGSLKPPVKTEDIIQSVLTELEAHTEEELKQQKGFVREQRKQ
YKEMKELVRKHHRKTAELIKEHTARVAELQGQQQRRRSAMQKSHKRDGKKSRSEYSLSTL
DQDLCDLEQDYSRRLLELKEQQQQQLLTLRQEQYYSEKYQKREHIKQLVEKLTAIAEECQ
SAQLKKIRDVCEKEKKDLKKKMDKKRQEKINEAKSKDKNVTEEEKLEINRSFVNEVVQYI
KRLEDAQTKRHERLLEKHKDIRQQILDERPKLQSDLDQEYQDKFRRLPVEIQEFVQDSGK
SKLGHGNLVASTTAEKLGHKAPHSEDDAEDGSSERVYDTPL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcacagccgggagtccacgcgctgcagctcgagcccgtgtccgtgcccgag
agcctgagacgcggcaacacgtttttgaaatgggatgatgattccaccaccgtgaccccg
gtgactctgacggtcgaccccaacggttacttcctgtactggaccgaccagaacaaggaa
acggatctactggatatatcgtacataaaagacgccaggaacgggaagtgcaccaagacg
ccaaaggaggccaagctgcgcgagctgctggatgtcagcacgctggcggggaagatggag
aaccggatgctgacggtggtgagcggcctcgacatggtcaacatcacctacctgaacttc
atggccttccaggaggagacggcgaaggagtgggcggaggagctgttcaacctggcatcc
aacctcttggtccagaacatgtccagagaggactgcctggagaaagcatacactcggctg
aagctgcagctcaaccccgagggccgaatccccgtcaagaatatcttccggatgttctct
gcagacaggaagcgggtggagacggcgctggaaaactgtaaccttccttccgtcaggagc
gactccatccccctggaggacttcaccccggaggtctacagcctgttcctggggaacatc
tgcccccggaccgagctggaccacatcttctccgacattagcgaaagggcgcgtccgtcc
ctcagcgtggagcagctgacggagttcatcaacaacaagcagcgggaccctcggctcaac
gagatcctctacccgcctctgaaggcggagcaggtccagctgctggtggacaagtatgaa
gccgacgcttcgctggcgcagagaggtcagatctcggtggagggcttcgcccgctacctc
gacggggaggagaacagcatcatgccccccgagaagctggaccagagcgaagacatgacc
ctccccctctcccactatttcatcaactcctcacacaacacatacctcacagccggccag
ctggcgggcagctcctcggtggagatgtataagcaggtcctcttgtccggctgccgctgc
atcgagctcgactgctggaagggccgcaccaccgaagaagagccggtcatcactcacggc
ttcaccatgacaacggagatctccttcaaggaagtgatcgaggccatcgccgagtgcgcc
ttcaagacctcgcccttccccatcatcctgtccttcgagaaccacgtggactcaccgaag
cagcaggctaagatggcagagtactgccggtcaatattcggagacgcgctactgactgaa
cctctggagaaatattctctggagtccggcgtgcccctgccgagcccgatggagctgatg
gggaagatcttggtgaagaacaagaagaagcaccacaaggccgacggcagcgccaagaag
aagctgtcggagcaggtgtccaacacctacagcgactcctccagcgtgtgcgagccgtcc
tcccccagcacaggctcaaccaaagaggagatggcagattcctcgcagactcccgacggc
gccgagctcagcctgaggccgcagggcaggaagtccatcggagaggtggaggcagagagt
gaggatgaagatgacgatgatgacgactgtaagaagggctcgatggacgagggcacagcg
ggcagcgaggcgtttgccacggaggaaatgtccaacctggtgacgtacatccagcccgtc
aagttcaacagcttcgaggcctcgaaaaagatcaaccggagttaccagatgtcgtccttc
gtggagaccaaagcgctggagcagctcaccaagtgtcccgtggagttcgtggagtacaac
aagctgcagctgagcaggatctaccccaaaggcacccgggtggactcctccaactacaac
ccgcagctcttctggaacgccggctgccagctggtggcgctcaacttccagaccatcgac
ctgtccatgcagctgaacctcggcatgtacgagtacaacgggaagtgcggcttcagactg
aaaccggagttcatgaggcggccggacaaacactttgaccccttcaccgagagcacggtg
gacggcatcgtggccaacacgctgtccgtcaagatcatttcgggccagttcctctccgat
aagaaggtggggacgtacgtggagatcgacatgttcggcctcccggtggacaccaagagg
aaagccttcaagaccaggacgtctcccagcaacgccatcaaccccgtgtgggaggaggag
gccatcgtcttcaagaaggtggttctgcccacgctggcttccttgaggatcgccgtgttt
gaagaaggagggaagttcatcggccaccggatcatccccgtgtcggccatccgcccagga
taccactacatcagcctgaggaacgagaagaaccaggcgctgacgctgcccacgctgttc
gtctacgtggaggtgaaggactacgtcccggacacattcgcagacgtcatcgaggcttta
tccaatcccatccgctacgtcaacctgatggagcagagggccaatcagctggctgcgctc
acgctggaggagggaggagaggaggagggcgacaaagaggcggaggcagggagcgacgcc
ccctccgagtcgaaggtggacccgagggcgacgctgcccgcggagaacgggctgagctac
acggccatcatcgcccccaagccgccggcgctggtcggccaccagccgcagtctgcaggc
tcactgaagccaccagtgaagactgaagacatcatccagagtgtcctcaccgagctggag
gctcacacggaggaggagctgaagcagcagaagggcttcgtgcgggagcagaggaagcag
tacaaggagatgaaggagctggtccggaagcaccaccgcaagacggccgagctcatcaag
gagcacacggcccgcgtggccgagctgcagggccagcagcagcggcgccgctccgccatg
cagaagagccacaaacgagatggtaagaaaagtcggtccgagtactccctgtccaccctg
gaccaggacctgtgtgatctggagcaggactacagccggcggctgctggagctgaaggag
cagcagcagcagcagctgctcacgctgcggcaggaacagtactacagcgagaagtaccag
aaacgagagcacatcaagcagctggtggagaagctgaccgccatagcggaggagtgccag
agcgctcagctcaaaaagatcagagacgtctgtgagaaagagaagaaggacctcaagaag
aaaatggacaagaagaggcaagagaagatcaacgaggccaagtctaaagacaagaacgtg
acggaggaagagaagctggagatcaacaggtcgttcgtcaacgaggtggtgcagtacatc
aagcggttggaggacgctcagactaaacgacatgagcggctcctggagaagcacaaagac
atccgccagcagatcttggacgaaaggccaaagctccagagcgacctggaccaggagtac
caggacaagttccgccggctccccgtggagatccaggagttcgtgcaggacagcggcaag
tccaagctcggccacgggaacctcgtcgcctcgacgaccgcggagaagctcggccacaag
gcgccgcactcggaggacgacgcggaggacggctcgtcggagcgagtctacgacacgccc
ctttag
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