Pseudoliparis swirei (Mariana hadal snailfish): 130202689
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Entry
130202689 CDS
T09868
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130202689 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202689 (tbpl1)
03021 Transcription machinery [BR:
pswi03021
]
130202689 (tbpl1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
130202689 (tbpl1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130202689 (tbpl1)
RNA polymerase III system
TFIIIB
130202689 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
130202689 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
130202689
NCBI-ProteinID:
XP_056284380
LinkDB
All DBs
Position
12:complement(7516842..7523820)
Genome browser
AA seq
217 aa
AA seq
DB search
MDSSNDDALDIIITNVVATFRTRCHLNLRTIALEGNNVIYKPEFGKVMIKLRKPRITASI
WSSGKIICTGATSEDDAKIGARRLARVLQKLGFKVRFSAFKVVNVLAVCSMPFAIQLIDF
TKKNRPIASYEPELHPAATYRIKHIKATVQVFSTGSITITGTSHTATPTCRRNSLTLVYA
HQLMGLRLCCGNALFIFCVYQKSGLLITQFPEAFHSG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggattccagcaatgacgatgcacttgatatcatcatcaccaatgtggtggcaactttc
aggacaaggtgccacctcaacctgcgcaccattgccttagagggaaataatgtcatctat
aaaccagaatttgggaaagtcatgataaagctccgtaaacccagaataacagcctcaatc
tggtcctcggggaaaatcatctgcactggagcaacaagtgaggatgatgcaaaaattggt
gctcgccggttagcacgcgtcctgcagaaactcggcttcaaggtgaggttttcagccttc
aaagttgtgaatgtcctggccgtgtgctccatgccgtttgcgatccaactcatagacttt
acgaagaaaaaccgccccattgccagttacgaaccagaactccatcccgctgccacgtac
aggatcaaacacatcaaggcaactgtccaggtgttctctactggcagcatcaccattaca
ggtacctctcacactgccacacctacatgcagacgaaactctctcaccctggtttacgca
caccagcttatgggattgaggttgtgttgtggtaatgccctttttatattctgtgtctat
cagaaaagcggcttgttaataacccaattccccgaggcatttcactcggggtga
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