Pseudoliparis swirei (Mariana hadal snailfish): 130202743
Help
Entry
130202743 CDS
T09868
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04519
Cadherin signaling
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130202743 (pals1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130202743 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130202743 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
PDZ domain-containing proteins
MAGUK family proteins
130202743 (pals1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
SH3_2
SH3_1
PDZ_2
L27
SH3_9
Motif
Other DBs
NCBI-GeneID:
130202743
NCBI-ProteinID:
XP_056284444
LinkDB
All DBs
Position
12:complement(12803927..12823195)
Genome browser
AA seq
646 aa
AA seq
DB search
MIMSHMNGYVHEASGQAPSHRERAVDCPGDESCLVKSPHCSAHMERIQHYQEELKKRREE
DTRGKHDIDPNASLRLKKLSQNPKVGIDNPTFEGKEKAIKDTFHQDPVAEVAELLQTLKW
AHRCLPDAQSQQDVELIMQLLTKEDFKNAYSIYMAVSRVIPTSALTGQAEDLCQEVQKIL
LSSQHKEGLELTALLTNPHLQALMQAHGSVAGQEVAEDDSTQYIGESVKLVRLEKARDTP
LGATVRNDMDSVLVSRVVKGGAAEKSGLLSEGDEILEINGISIRGKHVNEVHDLLQQMQG
TLTFLLIPSSQIKPAPRRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQRGDILHVISQDD
TNWWQAYRDGDEDNQPLAGLIPGKSFQQQRETLKKTITDSSQEQQGRLWYAKKSKRPKKK
STSTLCRNIDYDDILTYEEMSLYHQPANRKRPIGLIGPTNGGHDELRRRLLSIEPEKFAV
AVPHTTRNSRIHERNGREYHFVSRLVFETDLAAGKFIESGEYEKNLYGTGSDSVRHVINS
GRICLLCLHTKSLQVLRSSNLKPFVIFIAPPSQERLRTLLASDGKTPKPEDLKEVIEKAR
EMEQNFGHFFDATIVNMDPEQAFHELRRLIDKLDTEPQWVPTSWLC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcccatatgaacggttatgtgcatgaggcctctggtcaggccccgagccac
agggagagggcagtggactgtccaggggacgaaagttgcctcgtcaaatctccacattgc
agcgcccacatggagaggatccagcactaccaggaggagcttaagaagaggagagaggag
gacaccagggggaagcatgacatcgaccccaatgcttcactgagactcaagaagctgtca
caaaaccccaaggtgggcattgacaatcccacctttgagggaaaggagaaggccatcaaa
gacacattccaccaggatcctgtcgcggaagtggcggagttgttgcagactctgaagtgg
gcgcaccgctgcctgcctgatgcgcagagccagcaggatgtggagctgataatgcagctc
cttaccaaggaggacttcaagaatgcctactccatctacatggctgtatcccgagtcatt
cccacctcagccctcaccggacaggcagaagatctctgccaggaggtccagaagattctg
ctgtccagccaacataaggaggggttggagctcacggctctgctcaccaatcctcacctc
caggcactgatgcaggctcatggcagtgtggcggggcaggaagtggcagaagacgattcg
actcagtacatcggagagtcggttaaactggtgcggctggagaaggcccgcgacactcca
ctgggtgcaacggtacgtaatgacatggacagtgtgctggtgagtcgtgtggtgaaaggt
ggagcagcggagaagagcggccttctcagtgagggagacgagatcctggagatcaacggg
atatctattcgtggaaaacatgtcaatgaagtccacgacttactgcaacaaatgcaaggc
actctgaccttcctcctcattccgagctctcagattaaacctgccccacgcagacagacc
gtgatgcacgtacgagcttactttgactacgacccctccgatgacccctttgtgccgtgc
cgggagttgggcctgtccttccagagaggagacatcctccatgtcatcagccaggatgac
accaactggtggcaggcctacagggatggagacgaggacaaccagcctctggctggactc
attccaggaaaaagcttccagcaacagagagagaccttgaagaaaacgataaccgacagc
agtcaagagcaacaagggaggctttggtatgcaaagaaaagcaagagaccgaagaagaag
agcacgtctaccttgtgcagaaacattgactacgatgacatcctgacctatgaggagatg
tcactttatcaccagcctgccaatcgcaaacgccccatcggtctgattggtcctacaaac
ggcggtcacgacgagctgcgtcgaaggcttctgtccatcgaaccggaaaagtttgctgtt
gccgttccacacacaaccagaaactcaaggatacacgagcggaatgggcgcgagtaccat
tttgtgagtcggctcgtctttgaaaccgacttagcggcaggaaaattcattgagtcgggg
gaatatgagaagaacttgtacggcaccggctcggactcagtccgacatgtcatcaactct
ggacgcatctgtttgctctgcctccacaccaagtcactgcaggtactaaggtcctccaac
ctcaaaccctttgtcatcttcatcgctcctccttctcaggaacgactgcgcaccctgctg
gcctcagacgggaaaacaccaaagcctgaagacctaaaggaggttattgagaaggcccgc
gaaatggagcaaaatttcggccacttctttgatgcaaccatcgtgaacatggatccagag
caggctttccacgagctgcgcaggctgatagacaagctggacacggagccccagtgggtg
cccacctcttggctgtgctag
DBGET
integrated database retrieval system
