KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130202757
Entry
130202757         CDS       T09868                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130202757 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130202757 (smek1)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     130202757 (smek1)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     130202757 (smek1)
SSDB
Motif
Pfam: PP4R3 EVH1_PP4R3 WH1 Ran_BP1 IgD_del_linker
Other DBs
NCBI-GeneID: 130202757
NCBI-ProteinID: XP_056284474
LinkDB
Position
12:complement(11938231..11950893)
AA seq 861 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGTSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDVVDESEEE
RFDDMSSPGLELPPCELNRLEDLAEMVASSLPSPLRREKLALAVENEGYIRKLLELFRVC
EDLENREGLHHLYEIIKGIFLLNRTALFEVMFSEECIMDVIGCLEFDPALAQPRRHREFL
TETARFKEVIPISDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTDLFAQLTDEATDDDKRHELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVQVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLSFFYKHCMHVLSAPLLANT
TEEKPGKGIVCVNMCVCVCVNMCAGFVNTTLMHTYLLLPSNKILLLDDFQTSQLMALILE
LLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLALCALRFMRRIIGLKDEFYNRYI
MRNFLFEPVIKAFLNNGSRYNLMNSAIIEMFEYVRVEDVKSLTAHIVENYWKALEDVDYV
QTFKGLKLRYEQQRERQDNPKLDSMRSILRNHRFRRDARTLEDEEEMWFNTDEDDLEDGE
AVVPPSDKMKSEEDLMEPISKFMERKKLKDTDEKDLLGKSSLSGRQNPSFKLSFSGSTKT
SLSSPPSSASLNPGSPGSPGSPGSGARSSPSTTTVTTKGGLVGLVDYPDDDDDDEEDEEE
EEDGESKEDPLPPLKKSKLSS
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgacggacactcgtcgacgagtcaaagtctataccctcaatgaggacagacagtgggat
gaccgtggaaccggccacgtctcctcgggctatgtggagcgtctgaaaggcacgtctctc
ctggtgcgagcagagagtgatggttctttactgctggagtccaaaatcaatccaaacacg
gcctaccagaagcaacaggatactttgatagtatggtcagaggcagaaaattatgatctg
gcactgagcttccaggagaaggctggctgtgatgaaatctgggagaaaatatgccaggtt
cagggaaaggacccatcggtggacattacccaggatgtggtcgacgagtctgaagaggaa
cgctttgacgacatgtcctcgccaggtctggagttaccgccgtgtgaactgaaccgcttg
gaggacctggctgagatggtggcctcctcactcccatcaccactgcggcgtgagaaactg
gcactagccgtggagaacgagggctacattcgcaagctcctggaactgtttcgtgtgtgt
gaggatttggagaacagagagggactgcatcacctgtacgaaatcataaaaggcatcttc
ttgctaaatcgtactgcactctttgaggttatgttctccgaggagtgcatcatggacgtc
attggttgtctggagtttgatccagcacttgcacagccacggcggcatcgggagtttctc
actgagacggcccgctttaaggaggtgatccccatctctgatcctgaactgcgtcagaaa
atacaccagacatatcgggtgcaatatattcaggacatggtgttgcccacgccctctgtt
tttgaggaaaacatgctgtccaccctgcactcgttcatcttcttcaacaaggtggagatt
gtgggcatgctacaggatgatgagaagttcctgacagacctctttgcacagctaacagat
gaggctaccgatgatgacaaaagacacgaactggtgaatttcctaaaggaattttgcgca
ttctcacaaacgttacaacctcaaaacagagacgccttcttcaagactttgtcaaacatg
ggaattctacctgcactagaggtcatactgggaatggatgacgttcaggtgcgtggggca
gccacagatattttctcttatctggtggagtacaacccctccatggtacgagagttcgtc
atgcaggagtctcagcagaatgatgacgacatcctcctgatcaacctgatcatcgaacac
atgatctgtgatacggacccagagctcggtggagcggtgcagctgatgggtctgctacgg
actctggtggaccctgagaacatgctggctacggcaaataaaaccgagaagacagagttc
ctgagcttcttctacaaacactgtatgcacgtcctctcagcgccactgctggccaacacc
acagaggaaaaaccaggcaaaggtattgtgtgtgtgaacatgtgtgtgtgtgtgtgtgtg
aacatgtgtgctggttttgtaaatacgactttaatgcacacatatttgttgctaccttct
aacaaaattcttctcttagatgattttcaaacatcccagttgatggccctgattttggag
ctgctgaccttctgtgttgagcaccacacgtaccacataaagaactacatcatcaacaag
gacattctcaggcgggtgctggtgctcacggcctctcagcacgccttcctggcactatgt
gccctccgcttcatgcggaggatcattggtctgaaggatgagttctacaatcgctacatc
atgagaaactttctcttcgagcctgtcatcaaggccttcctcaacaacggctcccgctac
aatctcatgaactcggccattattgagatgtttgagtacgtccgtgtggaggacgtgaag
tcactcacagctcatatagtagagaactactggaaagctctggaggatgtggactacgtc
caaacgttcaagggcctaaagttgcggtacgaacagcagcgagagagacaagacaacccc
aaactggacagcatgcgctccatcctgaggaaccaccgcttccgtcgtgatgcacggaca
ctggaagatgaagaggagatgtggttcaacaccgatgaggatgaccttgaggatggtgag
gcagtggttcctccatctgacaagatgaagagtgaggaagacctcatggaacctataagc
aagttcatggagagaaagaaattgaaagacacagacgagaaagacttactggggaagtcg
agtttatcgggccggcagaacccgagcttcaagctctccttctccggctccactaaaacg
agcctgtccagccctccatcgtctgcctcattgaacccaggttctccaggatcaccgggt
tctccaggctcaggggcacgcagctcaccgtccaccacaactgtaaccacaaagggaggt
ttagtgggactggtcgactatcccgatgatgatgacgacgacgaggaggatgaagaagag
gaggaggatggcgagagcaaagaggaccctctgccacctttgaagaagtccaaactgagt
tcttaa

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