Pseudoliparis swirei (Mariana hadal snailfish): 130202828
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Entry
130202828 CDS
T09868
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130202828 (med23)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
130202828 (med23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DUF7206
Motif
Other DBs
NCBI-GeneID:
130202828
NCBI-ProteinID:
XP_056284573
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All DBs
Position
12:6055677..6071751
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AA seq
1412 aa
AA seq
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MALSMETQLQSIFEDVVKTEMIEEAFAGMLMDTHEDERTKLISCLGAFRQYWGTLPQESH
EQCVQWIVRFIHSQHSPKRISFLHDCLAMAVETSLLPPRMVCVALISSDSLEWERTQLWA
LTFKLIRKIIGGMDYKGVRDLLKAVLDKIQTIPTTVSSAIVQQLLTAREVVEYILDRNAC
LLPAYFAIAEIRKMYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLHFPMRGMLPFDKDLFEPQTGLLRYVLEQPYSREMVCNMLGLNKQHKQR
CPVLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL
SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDI
NKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKTLGMSDYKI
ALLCNAYSTNSECFTLPMGVLVETIYGNGSMRINLPGTNCMASGSVTPLPMSLLDSLTVH
AKMSLIHSIATRVIKLAQAKSSITLAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFK
SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLIT
ALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHITDFFTGSDSIQGTWCKD
ILQTIMTFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMANEN
DMITHFSMQGSPPLFLCLLWKMLLETDYINQIGFRVLERIGARALVAHVRTFADFLVYEF
STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN
DFRNRVNDFVKDNSPEHWLQSDWHNKHMSYHKKYPEKLYFEGLAEQVNPPMQLQPQYLPI
YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYER
HLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYLKCGMNAREDNVWIPDDTYYCKLIGR
LVDTMAGKSPGPFPTCDWRFNEFPNPAAHALHVTCVELMALAVSGKDVGNALLDVVLTSQ
PLVPRENITAWMNAIGLVITALPEPYWIVLQDRIVSVIGSPVLTSETEWAGYPFALLDFT
ACHQSYSEMNCSYVLALAHAVWHHSSIGQLSLIPKFLSETLKPVVQTEFQLLYVYHLVGP
FLQRFQQERTRCMLEISVAFYEMLQAVDQHCQHLSYMDPICDFLYHIKYMYTGDSVKEQV
EKIIMTLRPAMKLRLRFITHSSLIETSSSAAAAAAAATAATATAAAASSSSSSSSSSAPQ
PPTSSLSASSAVASPVPTQQQQQAHTPINQRN
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatcgatggaaacgcagctccagagcatctttgaggatgttgtgaaaaccgag
atgatagaagaggccttcgctgggatgttgatggacactcatgaagatgagaggactaaa
ctgatcagttgtctgggagccttcaggcaatactgggggactctgccacaggagtctcat
gaacagtgtgtgcagtggatagtgcgcttcatacacagccagcacagtcccaaaaggatc
tccttcctccatgactgtctagcgatggctgtggagaccagtctgttaccgcccaggatg
gtgtgtgtagctctgataagctcggacagtttggagtgggagaggactcaattgtgggcc
ttaacttttaaactgattcgcaagatcatcggagggatggactataagggtgttcgagat
ctgttgaaagctgtactggataaaatacaaaccattcccaccactgtcagctcggctata
gttcaacagcttctgaccgccagagaggtggtggagtacatcctagacagaaatgcctgc
ctcctgccagcctactttgccatcgcagaaattagaaaaatgtatccagaagggcagcta
tcacactggcttctcggcagtttgatatcagactttgtggacagtttcagacccacagcc
agaataaactccatctgtggtcggtgcagcttgttaccagtagtgaacaacagcggggcc
atctgtaactcctggaaattagaccccactaccctccacttccctatgaggggcatgctg
ccgtttgacaaggacctgtttgagccacagacgggcttgctgcgctacgtattagaacag
ccatattcaagagaaatggtgtgcaacatgttaggactcaacaagcagcataagcagcgt
tgcccggtgctggaggagcagctggtggacctggtggtgtacgccatggagcgctccgag
accgaggagcactttgacgccgacatcgggggcaccagccagctgctgtggcagcacctc
tcctcccagctcatcttctttgtgttgtttcagttcgccagcttccctcacatggtgctg
tcgctgcatcaaaagcttgcaggtagaggtctcataaaagggagagaccacctgatgtgg
gtcctgctgcagttcatatcgggaagcattcagaagaacgccttggcggacttcctgccc
gtcatgaagctgtttgacctgctttacccagaaaaggagtgcattccggttccagacatt
aacaagccccagtcgactcactcctttgccatgacctgcatctggatccacctgaaccgc
aaagctcagaacgacaactccaaactgcagatacccattccccactctctgaagctacac
cacgagttcctccaacagtcgctgcgtaacaagactctgggtatgtccgactacaagatc
gccctgctgtgcaacgcctacagcaccaactccgagtgcttcaccctgccgatgggcgtc
ctcgtcgagaccatttacggaaacgggtccatgaggatcaacctgcccggcaccaactgc
atggcgtccgggtcggtcaccccgctgcccatgagcctgctggattcgctcacggtgcac
gccaagatgagtctgatccacagtattgccacgcgggtcataaagttggcccaagccaaa
tccagcatcaccctggcccccgcgctggtggaaacatacagccggctgctggtctacatg
gagatcgagtccctgggcatcaaaggattcatcagccagttgctgccgaacgtgttcaag
tctcacgcgtggggaatccttcacacgctcctggagatgttcagctacaggatgcaccac
attcagccgcactaccgggtccagcttctgagtcacctgcacagcctggctgccgtgcct
cagaccaaccagaaccagctgcatctatgtgtcgagagcacggctctgcggttgatcacg
gctctggggagttcggaggtgcagccccagttcactcgcttcctcaacgacccaaagacg
gttctgtcggcggagtccgaagagctgaaccgcgccttgatcctcactctggccagagcc
acgcacatcacagacttcttcacgggctccgactccatccaggggacttggtgtaaagac
atcctccagaccatcatgaccttcacgcctcataactgggcctcacacacgctgtcctgc
ttcccagcgccactacaggcgttcttcaaacagaacaacgttccccaggagtctcgattc
aacctgaagaagaacgtggaggaggagtacaggaagtggaagtccatggccaacgagaac
gacatgatcactcacttctccatgcagggctcccccccactgttcctctgtctgctgtgg
aagatgctgctggagacggactacatcaaccagataggcttcagggtcttggagcgcatc
ggggctcgtgcgctggtggcccacgtgagaacgttcgccgactttctcgtctacgagttt
tcgacgtcggccggcggacagcagctcaacaagtgcatcgagatactcaacgacatggtc
tggaagtacaacatcgtcaccctggaccgactcatcctgtgtctggcgatgcgcagccac
gagggcaacgaggctcaggtctgctacttcataatccagctgctgctgctgaagcccaac
gacttccggaaccgggtcaacgattttgtcaaggataactctccggagcactggctgcag
agtgactggcacaacaagcacatgagctaccacaagaaataccccgagaagctgtacttt
gagggactcgcggagcaagtcaaccctcccatgcaactgcagccgcagtacctgcccatc
tactttggcaacgtgtgcctgcgcttcctgcccgtcttcgacatcgtcatccaccgcttc
ctggagctgcttcccgtctccaagtctctggagacgctgctggaccatttgggaggcttg
tacaagttccacgaccgcccagtcacctacctgtacaacacactccactactacgagcga
catctgagagacagaaccaacctgaagaggaaactggtgcacgccatcatgtcgtcactg
aaggacaaccgcgccccaggctggtgcctgagtgaaacctatctgaagtgtggcatgaac
gccagagaggacaacgtgtggatccccgacgacacctactactgcaagctgattggacgc
ctggtggacacgatggcgggcaagtctcccggtcccttccccacctgtgactggcggttc
aacgagttccccaaccccgcggcccacgccctgcacgtcacctgcgtggagctgatggcg
ttggccgtctcagggaaagacgtcggcaacgctctgctcgacgtggtgttgacgagccag
cctctggttcccagagagaacatcacagcgtggatgaacgccatcggacttgtgataacc
gcacttcctgagccctactggatcgttctccaagaccgcatcgtgtccgtgatcggctcc
ccggtgctgacgtcggagacggagtgggccggttatcccttcgccttgctggacttcacc
gcctgccaccagagctacagcgagatgaactgcagctacgtgctggcgttggcgcacgcc
gtgtggcaccactcgtccatcgggcagctgtctctgatccccaaattcctgtcggagacc
ctgaagcccgtcgtgcagacggagttccagttgctctacgtgtaccacctggtcgggccg
ttcctgcagcgcttccagcaggagaggactcgatgcatgctggagatcagcgtggccttc
tacgagatgctgcaggcggtggaccagcactgccaacacctcagctacatggaccccatc
tgtgacttcctgtaccacattaagtacatgtacaccggggacagcgtcaaggagcaggtc
gagaaaatcatcatgactctgcgtccggccatgaagctgcgactgcgcttcatcacacac
agcagcttgatagagacttcatcatcagccgcggccgccgctgcagccgccaccgctgcc
accgccaccgctgccgccgcctcctcttcctcctcttcctcctcttcctccgcccctcaa
ccccccacctcctcactctcggcgtcctctgccgtcgcctcccctgtccccacacagcag
cagcagcaggcacacacacccataaatcagcggaactga
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