Pseudoliparis swirei (Mariana hadal snailfish): 130202834
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Entry
130202834 CDS
T09868
Symbol
rnf217
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RNF217
KO
K11977
E3 ubiquitin-protein ligase RNF217 [EC:
2.3.2.31
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130202834 (rnf217)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130202834 (rnf217)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130202834 (rnf217)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Motif
Other DBs
NCBI-GeneID:
130202834
NCBI-ProteinID:
XP_056284586
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All DBs
Position
12:6306990..6318205
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AA seq
581 aa
AA seq
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MGRALSGMDDDEPIADACIMPSLMSSLEDGRGKLSRNPRTETSFVDCKLEPSVRDLSRRV
TRSNSRLSLDGGERYSEERGGGGEAKDAKGNNNNNNCNGGGERRRRASAVEILRRNFGVS
RSPSLCFNTSSRMQRGAELEPREANGHSDVSNGRATEAGECKKLERETGDAGTKNEPTAS
DSTASDAKGVERVAVTSRRSSTRDGDADAVALDESLNGKEHVYCTVYCIESESRRKKDVE
ITDDEAVASDAPDVALDSEAGREAAPSPEPAALYTLDDLVDPLGDVARRPSARQAGAETA
TQSCRVCLEEKTIAPLPCCRKAVCDECLKLYVSSQVRVAKSYIGCPIPECSGYLDEGVVI
SHLANEDVAKYRYFLELSELDSSTKPCPQCSQFTSLKGSDPNHSEHKYKIQCSNCQFVWC
FKCHAPWHSGVKCRDYRKGDKLLRGWASVIEHGQRNAQKCPQCRIHIQRTEGCDHMTCTQ
CNTNFCYRCGERYRHLRFFGDHTANLSVFGCKYRYLPDKPHLRRLVRGSVCGSKVLIAPV
VILLVVVLGALALVIGLVVFPVYYXCKRRKKQRAQGSGRWI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggggagagcactctcggggatggacgatgacgaaccgatagccgacgcctgtattatg
ccgagtttaatgagcagtctcgaggatgggagagggaaactgtcccgcaacccgcggaca
gaaacttccttcgtggactgcaaacttgaaccgtcggtcagagatttgagtcgccgcgtc
acccggtcgaactcccggttgtcgctcgacggaggtgagcggtactcggaggagagaggc
ggcggcggcgaggcgaaggatgcgaagggcaacaacaacaacaacaactgcaacggcgga
ggagagaggaggaggagggcgagtgctgtcgagattttgaggaggaatttcggcgtttcg
aggtccccgtccttgtgtttcaatacgagcagtcggatgcagcgcggcgccgagctggag
ccccgcgaagccaacggccacagcgacgtttctaacggtcgcgcaacagaagctggcgaa
tgtaaaaagttggagcgagaaacgggcgacgcggggactaaaaacgagcccaccgcgagc
gactcgaccgcttctgatgcgaagggagtcgagcgcgtcgccgttacgagtcggcgaagt
tcgacgcgcgacggtgacgccgacgcggtcgctttggacgagtctcttaacggcaaagag
cacgtctactgcaccgtgtattgtatcgagagcgaaagtcgccgaaaaaaagacgttgaa
atcacggacgatgaagcggtggcgtcggacgcaccggacgtggcgttggactcggaggcg
ggacgggaagctgctccgagtcccgaacccgcggctctgtacacgctggacgacctcgtg
gatcctctcggcgacgtggcccgtcggccgtccgcgcggcaggccggtgctgagactgcg
acgcagagttgccgggtgtgcctggaagagaaaaccatcgcacccttgccgtgctgcagg
aaggccgtgtgcgacgagtgtctgaagctctacgtcagctcccaggtgcgagtggccaaa
tcgtacatcggctgtccgatccccgagtgcagcggctacctggacgagggggtggtgatc
tcccacttggccaacgaggacgtggccaagtatcgctacttcctggaactgagtgagctg
gactcgagcaccaagccctgcccccagtgcagccagttcacctccctgaaggggagcgac
cccaaccactcggagcacaagtacaagatccagtgcagcaattgccagtttgtgtggtgc
ttcaaatgccacgcgccgtggcacagcggggtcaaatgccgcgactacaggaaaggagac
aagctgctgcgaggctgggcgagcgtcatcgagcacggccagagaaacgcccagaagtgc
ccacagtgccggatccatatccagcgtacggagggatgtgaccacatgacgtgcacgcag
tgcaacaccaacttctgttaccgctgtggagagcgttaccggcacctacggttttttggg
gaccatacagccaacctcagcgtgttcggatgcaagtatcgctacctcccggacaaacct
cacctgaggcggctcgtcagagggtcggtctgtggctctaaggtgctaatagctccagtg
gtcattttgctggtcgtggtgctcggagctctcgcactggtgataggattggtggtcttc
ccggtctactacnngtgtaagaggaggaagaagcagcgagcgcagggctccggacgctgg
atctga
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