Pseudoliparis swirei (Mariana hadal snailfish): 130202895
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Entry
130202895 CDS
T09868
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130202895 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202895 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130202895 (esr1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
130202895 (esr1)
Nuclear receptors [BR:
pswi03310
]
3. Estrogen like
3A. Estrogen receptor
130202895 (esr1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
130202895
NCBI-ProteinID:
XP_056284714
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Position
12:10451367..10464355
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AA seq
674 aa
AA seq
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MGGAFLISFSFFPLFFHCSNLVGGSLRQIGERDWKNSGHFKLPDGLCWNKGKRQSPAQSR
QPCGPVVGPRISPALSELETLSPHRPSPPPRAHFSDMYPEESRGSGGVATVDFLEATYDY
AAPTPAPTPLYSHSTPGYYSAPLDSHRPPSDGSLQSLGSGPASPLVFVPSSPRLSPFLHP
PSHHYLETTSTHVYSVPSSQQSVPREDQCGPSDESYSLGESGAGAGAGGFEMAKDTRFCA
VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQACRLRKCY
EVGMMKGGVRKDRGRILRRDKRRTGTGDRDKASKNLEPRTGPAQDGRKRSSSACAGGKSL
VTSMPPDQVLLLLQCAEPPILCSRQKLSRPYTEVTMMTLLTSMADKELVHMITWAKKLPG
FLQLGLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGDCVEGMAEIFD
MLLATASRFRLLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHDTAAVQHMLDTITDTL
IHHISQSGGPVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLLLEMLDA
HRLHRPDKPGEPWFNADGEPLSTASNDNNNSSSSGGGGFSGGSGSGPRVSLESPSRAPTV
LQYGGSHSDCTHIL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcctttttgatatctttttccttttttcccctttttttccattgcagtaac
ttggtgggcggaagcttaaggcagataggggaaagagactggaagaatagtggacacttc
aagttgccggacgggctttgttggaataaaggcaagaggcagagcccagcgcagagcaga
caaccttgtggaccagtagtcggacccaggatcagcccagccctctcagaactggagacc
ctctccccgcaccgaccctcacctccaccacgtgcccacttcagtgacatgtaccctgaa
gagagccgggggtctggaggggtagccactgtagacttcctggaagcgacatacgactat
gccgctcccacccctgccccgactcctctttacagccactccacccctggctactactcc
gctcctctggactcccacagaccaccctcagatggcagtcttcagtccctggggagtggg
cccgccagtcctctagtgtttgtaccctccagcccccgactcagtccctttttgcaccca
cccagccaccactatttggaaaccacctcaacacacgtctacagcgtcccatccagtcag
cagtcggttcccagagaagaccagtgcggccccagtgacgagtcttacagtctgggggag
tcgggggccggagcgggggccgggggctttgagatggccaaagatacgcgtttctgtgcc
gtgtgcagcgactacgcctctgggtaccactacggggtgtggtcctgtgagggctgcaag
gccttcttcaagaggagcatccagggtcacaatgactatatgtgcccagcaaccaatcag
tgcactattgacaggaatcggaggaagagctgccaggcgtgtcgtcttaggaagtgttac
gaagtgggcatgatgaaaggaggtgtgcgcaaggaccgtgggcgtattctgcggcgtgac
aaacggcgcaccggcaccggggaccgagacaaggcctccaagaacctggagccccggacc
gggccggctcaggacgggaggaaacgcagcagcagcgcttgtgcaggaggaaaatccctg
gtgacgagcatgcctccggaccaggtgctcctcctgctccagtgcgccgagccccccatc
ctgtgctctcggcagaagctgagccgaccctacaccgaggtcaccatgatgaccctgctc
accagcatggccgataaggagctcgtccacatgatcacctgggccaagaagcttccaggt
ttcctgcagctgggcctccacgaccaggtgcagctgctggagagctcctggctggaggtg
ctgatgatcgggctcatctggaggtccatccactgccccgggaaacttatctttgcccag
gacctaatactagacaggaacgaaggcgactgcgtcgaaggcatggcggagatcttcgac
atgctgttggccactgcttcccgcttccgcctgctcaaactgaaacctgaggagtttgtt
tgtctcaaagcgatcatcttgcttaactctggcgccttctcgttctgcacaggcacgatg
gagcccctccacgacaccgcggccgttcagcacatgctggacaccatcacagacacgctc
atacatcacatcagccaatcggggggcccggttcagcagcagtcgagacggcaggcccag
ctgctcctcctgctctcccacatccgacacatgagcaacaaaggcatggagcatctctac
agcatgaagtgcaagaacaaagtgcctctgtacgacctgctgctggagatgctggacgcg
caccgcctccaccgcccggacaaaccaggtgagccgtggttcaacgccgacggagagcct
ctctccaccgccagcaacgacaacaacaacagcagcagcagcggcggcggcggcttttca
ggaggatccggttcaggaccccgagtcagcctggagagcccgagcagagcccccacagtc
ctgcagtacggagggtcccactctgattgcacccacatcctatga
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