Pseudoliparis swirei (Mariana hadal snailfish): 130202903
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Entry
130202903 CDS
T09868
Name
(RefSeq) syntaxin-11-like
KO
K08487
syntaxin 11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130202903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130202903
Membrane trafficking [BR:
pswi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130202903
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
DUF6099
SYNE3
DUF2802
Transpos_assoc
Motif
Other DBs
NCBI-GeneID:
130202903
NCBI-ProteinID:
XP_056284731
LinkDB
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Position
12:complement(10348993..10350317)
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AA seq
297 aa
AA seq
DB search
MRDMLERLQTISEEQEDYEPGFYGTEDDPDKVTLSQQAVMFENSSTIDNILREAHSIRKE
ISLLHLEVEHLAINNERFGTSMRRLTLLKKDSDLIARGIQHHGGALAVRLQALGRESSQL
EAKEGLNSAVSRIARTQHDTLSRSFQAAMSDYNEAEEVQRDACRQRIQRQASILGTEITD
DQLDVMVDKGGEGWAELSQSLQTEGGHSSRWAMHEIKGRHKELVELEARLKEVHELFLDM
AMLVEEQGSMLNNIEAIVCGTEEYTEKINVYIKKALKYRKKSPFQQCCPCLSCCKPN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacatgctggagaggctgcagaccatcagcgaggagcaagaggactacgagcca
gggttttatggaactgaggatgacccagacaaggtgactttgtctcaacaggccgtgatg
tttgagaactcctccactattgacaacatcctgagggaggcccactccatacgcaaggag
atctccttgctccacctagaggtggagcatctggcgataaataacgaacgctttggcacc
tctatgcggcgtctcacgctcctcaagaaggactccgacttgattgccaggggcatccag
catcacgggggggctctggccgtccgcctgcaggccctgggtagggagagcagccagctg
gaggcaaaggaaggtctcaactctgctgttagtcgcattgcccgaactcagcacgacaca
ctgtcccgttccttccaagcggccatgagcgactacaatgaggcagaggaggtgcagagg
gatgcgtgccggcagaggatccagaggcaggcctccatactggggactgaaatcacagat
gaccagctggacgtgatggtggacaaaggtggtgagggatgggccgagctgtcccagagt
ctgcagaccgaaggcggtcactcgtcccgctgggcaatgcacgagatcaaaggcagacac
aaggaactggtggagctggaggcccggctgaaggaggtccatgaactattcctggacatg
gccatgctggtggaggagcaggggtccatgcttaataacattgaggcgattgtgtgtggc
acagaggaatatacagagaaaattaatgtttacatcaagaaggccctgaagtacagaaag
aagagtcctttccaacaatgttgtccctgtctatcctgttgtaaaccaaactaa
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