Pseudoliparis swirei (Mariana hadal snailfish): 130202985
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Entry
130202985 CDS
T09868
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202985 (pax1b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130202985 (pax1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
Motif
Other DBs
NCBI-GeneID:
130202985
NCBI-ProteinID:
XP_056284858
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All DBs
Position
12:2001093..2014163
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AA seq
331 aa
AA seq
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MTSSSLVSRPPELSYGEVNQLGGMFVNGRPLPTPVRLRIVELAQLGMRPCDISRQLRVSH
GCVSKILARFHDTGSVLPGAIGGSKPRVTTPVVVDRIRDYKRGDPAGIFAWEIRDRLLAD
GVCDKYTVPSVSSISRILRHKLGAPSPPGDRGKPGAQLQYGPGGYPYSPYTTGPGGGHPA
GHVGLPRSWHNILGIRAFMDPAALSGSDGASAPEDWTRPLPPHGAERTGRPLPPHGAERT
GEPDLKYLQQSSSSLPGYVSACAYSPPHQYGVYGGPAASYLNHWQTSQTPGLPPGPAGLH
PAASFKLLPQRDGDQKPPSPPYKHLRLSSTS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatctagtctcgtgtctcggcctccagagctgagctacggggaggtgaaccag
ctcggcgggatgttcgtgaacggccggccgctgcccaccccagtgcgcctgcgcatcgtg
gagctcgcgcagcttggcatgcggccgtgcgacatcagccgccagctgcgcgtgtcccac
ggctgcgtgtccaagatcctcgcgcgcttccacgacaccggctccgtgctgccgggggcc
atcggcggcagcaagccgcgggtcaccaccccggtggtggtcgaccgcatccgggactac
aagcggggcgaccctgcgggcatcttcgcctgggagatccgggaccggctgctggcggac
ggcgtgtgcgacaagtacaccgtgccgtcggtgagctccatcagccgcatactgaggcac
aagctcggggccccgtcgccgccgggggaccgcggcaagcccggggctcagctgcagtac
gggcccgggggctacccgtactccccgtacaccaccgggcccggtggggggcaccctgcg
gggcacgtgggcctcccgcgcagctggcacaacatcctgggcatccgggccttcatggac
ccggcagcgctgagcgggtctgacggggcctcggctccggaggactggacccggccgctg
cccccccacggagccgagaggaccggcaggccgctgcccccccacggggcggagaggacc
ggcgagccggacctcaagtacctccagcagtcttcgtctagtctgcccggttacgtctcg
gcgtgtgcgtattctccaccgcaccagtacggcgtgtacgggggtccggcagccagctac
ctgaaccactggcagacctcccagacccccggcctcccccccggcccagcaggtcttcac
cccgcagcatcatttaaactcctcccacaaagagacggtgaccagaagccgcccagtcct
ccgtacaaacacctccgactgtcttcaacgtcgtga
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integrated database retrieval system
