Pseudoliparis swirei (Mariana hadal snailfish): 130203061
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Entry
130203061 CDS
T09868
Symbol
tdrd6
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130203061 (tdrd6)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130203061 (tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
130203061
NCBI-ProteinID:
XP_056284926
LinkDB
All DBs
Position
12:21933680..21951191
Genome browser
AA seq
2340 aa
AA seq
DB search
MRAEKSWVAGIHETAKMSSIPGLPTKYSDVTVLISSVHLHPLCMLVEFWGKFSEQRKADY
ECLAREIQSPGNTFQEFEGNPGDQCLAQVDGSWYRSRIVSKNGSKYSVFLFDKGRTYRTA
TSQLAWGKKDHFHLPPEVEFCVLANVLPLSAEKKWSPVALEFLQSLSGKSVKAHVQDVLV
PHKTFLLHIPFISKQMYEMGIARKLSPDVFQDFVLMSLQSHSPMEASTETRISLAAGERL
SKNEVFMYPELSAGTVETVIVTEVTNPQRMFCQLKVFSQELKKLSGQITQCCEGRAANCI
VSPEMIGFPCAAKGSDGRWYRSVLQQVCSNNKVVGVLNVDYGTKEFVQIENVRPLASEFF
RMPVVTYVCSFHGVNNKGVGWTSSQIDYLKTLLLHKSVIAKFEYQSISEGVHYVTLYGDD
NSSINNLFSSMDSRSLESEKTLGDYAICNAASSCKQPAQQERNPGKMPTRAQTVTGTQRK
EMVYLPTENLALNSSHVAAVHHISDPSEFWIQTQTYAYKFDELMDSIYHLYKVPVDKDVV
RNPTVGLYCAAKAEDGEFYRATVAEGSGKQVTVFFVDYGNTKVVDRSDIRTLPDEFKKLP
CLSLKCSLAGVRPKDGKWSQSAQDFFLKAVKDKDLNVHVTAKYDEGYVVQLTDPEAQEER
DLSTLMCSSGHAERAEMQGQPKTNMTMQPAIPPQLPDARLSGVHGNKGTSFQTTVNPVGA
VGKETQIPSFKEHMFPIGSVIDVSVSYIESPNDFWCQQVKNAGHLKMLMHDIQTHYAGSE
FQSHVEMACIARHPDNQLWYRALVIYKRELPHLDVLFVDYGQTATVSRCDLRRIVPQFLS
LQGQAFRCSLLNPINPTSAVNDWNGEAVAKFRSFVDTAASTNYAIFKCTIYAVMYSEQKI
VFNIVDLETPFESVCTSIVNLLRSAPPQKAAGPSFRLDTYYYSTHNVKTGTEEPVTVTCV
NNVHEFYCHLEKNADVIKDLKIKVKNLCHQLGTVKLPTVFGTLCFAKYTDGQWYRGQIKA
IKPAILVHFVDYGDTIEVDKSDLLPIPREASDIMSVPVQAVQCSLSDVPANVPNEMNRWF
ETSATDCKFKALVVAREPDGKLQVELYHGNTQVNSKIKKMFHTEKQTEEAVVLQSRRALE
APANHLQKTPKVVPKQAANMQNDDMNLQSASKPLDVVCKNGRKIRAVPLEFYTPPHKRES
RSPEDGSESAVAHIKPRRESLPTETKQPIESKSPGTGFQIESAVEKYPELADLPPSSIVS
GMEADVYVSQCNSPLSFYVQLVREEDATFSLVEKLNGPQLTPETHIVKEVHPGELVQAEF
ADDSSWYRAVVREVQGKTMALVEFVDFGNTATMPISKIRILQKSLLQFPSYSTHCMLNEA
AGLGKEEVLDPEVLSAFKEDIGSNGEKLLKCNFVRQSGSVWEVRLEDNGVSVRCKVPPPG
STDCSGVTSEEPEQVKEPHAQIRQNVPENSPPNSSLCYQQEEFLEGQKMEVYITAISTAQ
NFWCQSADSEDLEKITSSVSKVFAADHKSVDPDSIALGSPCIALFSDDGFWYRAEVIGRD
GGELSVLFVDYGNKTRVNFTDVREMPPDLTGTPRQAFLCELEGFDAARGTWRSDAVDELS
ALTMDKVLQLTVARVAGEAGQIKLLVRLECEGQVINEALRTWWRSSASTENQPAASGLSP
PSQAPLQCEERSTGELVDPHADILPCDGGMDGIGLPQLQNKDAHGILTMSCDKSAVESDK
GVEEEEMLVMEINELDYFNSLLDENPTQATDESEVATTGLKSLPGEAPTGSVDIMTSSDL
TEDRDHSKVVMARDDSLTSAATVTTIQAEVLLPDCVLPAFDVPLEQEIDGADVPKEELPC
GTTHVQNDLMTTEDNVVHHGDGHTALTAATETPTAAPRDPGDEVKEKTCPVEVEICSVEV
ETCSVEVETCSVEVETCSVEVETCSVEVETCSVEVETCSVEVETCSVEEETCSVEVETCS
VDEETCSVEEETCSVEEETCSVEEETCSVEEETCSVEEETCSVEATGSVDATSCSVEEAP
CTVVKEAPCTVVKEAPCSVEAPCSVEAPCSVEAPCTVEEAPCTVEEAPCTVEEAPCSVEA
PCTVEEAPCSVEEAPCSVEEAPCSVEEAPCTVEAPCSVKEAPCTVEEAPCSVEEAPCTVE
EAPGLTDASTDPNQPRDDRLSTTSAEVQHDSLRPCRELQQLLPEALGEPELGERPLLDED
EHNENQDEAAALHLTRPFALLSDAEPPEGAGRRPPGSDPMGEESRRTAVCRGLRQEDVRE
EAEQQVHAPPRPREDVGVLQEDACSSADDGFEAQLSGVTHLSLLVCGGSEVLLAEQNPEE
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgaaaaatcatgggtagctggaattcatgaaactgccaaaatgtcatcaatt
ccaggactcccaaccaaatattcagatgtaacagtcctcataagcagtgtccacttgcat
cctctttgtatgcttgtggagttctgggggaaatttagcgagcagcggaaagcagattat
gagtgccttgccagagagattcaatctcctggaaacacatttcaagagtttgaaggaaat
cctggtgaccagtgcttggctcaagtggacggttcttggtacaggtctcgcatagtgtca
aagaatggctcgaaatacagtgtgttcctctttgacaaagggagaacatataggactgcc
acaagtcagctggcatggggcaagaaggaccacttccacctgccacccgaagtggaattt
tgtgtcctagccaatgtgttgccactctcagctgagaagaaatggtccccagtggctctt
gagtttctacaatctctctctgggaagtctgtgaaggcacatgtgcaagatgtactcgtg
ccacacaaaacctttctcctgcacatccctttcatatcaaaacaaatgtatgagatggga
attgccaggaagctgtctccagatgtgttccaggactttgtcctgatgtcgctgcagtcc
cacagtccaatggaggcgtcaacggagactcggatctccctggcagcaggcgagcgactg
agtaagaacgaggtgttcatgtacccggagttgtcagcaggaactgtggagaccgtcatc
gtcacagaagtgacgaatccccagcggatgttttgccagttgaaagtcttctcgcaagag
ctgaagaaactctcggggcaaattacgcagtgctgtgagggcagagcagccaattgcatt
gtaagtccagaaatgattgggtttccatgcgctgcaaaaggaagcgacggcaggtggtac
cgctctgttctacaacaggtgtgctcaaacaacaaagtggtgggagtgttaaatgtagac
tatggaaccaaagagtttgttcaaatagagaatgtaagaccactggcttcagagttcttc
aggatgcctgttgtgacttacgtctgctccttccatggagtcaataacaaaggggttgga
tggacatccagccagattgactatctcaaaacccttcttctgcacaagagtgtgattgcc
aaatttgagtaccaaagcatctctgagggtgttcactatgtcacgctctacggcgatgac
aactcgagcattaacaacctgtttagttccatggatagccgttctctggagagtgaaaaa
acacttggagattatgccatctgcaacgctgcatccagttgcaagcaacctgctcaacaa
gaacgcaacccagggaagatgccaactcgtgctcagactgtgacgggtacacaaaggaaa
gaaatggtgtacttgccaactgaaaaccttgcactcaattcctcacacgtggcagcagtt
catcacatatctgacccgtcagagttctggatccaaacacagacctatgcttataagttt
gatgaactgatggatagtatctatcatctgtacaaagtcccggtggataaagatgtggtg
agaaatccaacagttggcctctactgtgctgccaaagcagaagatggtgagttctacaga
gcaactgtggcggagggtagcggaaagcaagtcacggtgttctttgtggattatggaaat
accaaagtggtggacaggagtgacatcaggaccctccctgatgagttcaaaaagctgcca
tgtctgtcactgaaatgctccctggctggtgtccggccaaaagatgggaaatggagtcaa
agtgcacaagactttttcctcaaagcggttaaagataaagacctaaatgtacacgtgacg
gcaaaatacgacgagggttacgtcgtccaactaacggatcctgaagcacaggaagaaaga
gatctcagcacacttatgtgcagctctggccatgcggaaagagctgagatgcagggtcaa
ccgaaaacaaatatgactatgcagcctgctattccgccacaactcccagatgccaggctc
tcgggtgtacacggcaacaaaggaacgtctttccagacgaccgtaaacccagtgggcgct
gttggtaaggagacgcaaattccttcattcaaggagcacatgtttcccatcggaagtgtc
attgatgtcagcgtgtcctacattgaaagcccaaatgacttttggtgccagcaagttaaa
aatgcaggacacttaaaaatgctcatgcatgacatccagactcactacgctggcagtgag
ttccaatcacatgtggaaatggcgtgcatcgcccgccaccccgataaccaattgtggtac
agggcccttgtaatttacaaacgtgaactgccacatttagacgtgttgtttgtcgactat
ggccagacggcgaccgtctcccgctgtgacctgaggaggatcgtcccacaattcctttct
ctgcaaggccaagcttttcgatgcagtctgttaaaccccattaaccccacatctgctgta
aatgactggaatggagaagcggttgcaaagttccgcagctttgtggacacggcggcctct
accaactatgccatttttaagtgcacaatatacgccgtcatgtacagcgagcagaagatc
gttttcaacattgtggatctggaaacgccctttgagagcgtctgcaccagtattgtcaat
ctgctcagaagtgcccctccccagaaagctgcggggccatctttccgtctggacacgtac
tactactcgacgcacaatgtcaaaaccggaacagaggaaccggtcacagtgacgtgtgtg
aacaatgtccatgagttctactgccacctcgagaaaaacgccgatgtgatcaaagatctc
aagatcaaagtcaaaaatctctgtcatcagctcgggaccgtaaagctcccgactgtcttt
ggaactttgtgctttgcgaaatacacggatgggcaatggtacaggggacagatcaaggct
ataaagcccgcgattctggttcactttgtggattatggggacactattgaagtggacaag
tctgacttgcttccgattcccagagaggctagtgacatcatgtcagtgcctgtgcaagca
gttcagtgtagtctctctgatgtccctgccaacgtgcctaatgagatgaaccgctggttt
gagacgagcgcaacggactgtaaattcaaagctctggtagtggcgcgggaaccggacggg
aagctgcaggttgaactgtatcatggaaacactcaggtcaactcgaagatcaagaagatg
tttcataccgagaagcaaaccgaagaggctgttgtcctccagagtcggagagcgctcgag
gctccagcaaatcatttgcaaaagactccaaaagttgtcccaaaacaagctgcaaacatg
cagaacgacgacatgaatctgcagtctgcgtcaaagcctctggacgttgtttgcaaaaat
ggccgaaagattagagctgttccgttggagttctacacgcctccacacaaaagagagtca
cgtagcccagaagatggctcggagtcggcagtagcccatatcaaaccaagaagagaaagc
cttcccacagaaacgaaacagcccattgagtccaaatcccctggcactggattccagatt
gaaagcgctgtggaaaaataccctgaacttgcagatctgcccccaagctctatcgtatcc
ggaatggaagcagatgtttatgtctcccagtgcaatagccctctgagtttctatgtgcaa
cttgtcagagaggaggatgccacattctcccttgtggaaaagctaaatggtccccaactc
acccccgaaacccacatcgtcaaagaagtgcatccaggtgaacttgttcaagccgagttc
gctgatgattcctcgtggtaccgagcggttgtaagagaggtccaaggcaaaacgatggct
cttgttgaatttgtagatttcggaaacaccgcaacaatgccaatttccaagattagaata
ctccagaagtccttactgcagtttcccagctacagcacacactgtatgctgaatgaggct
gccggtcttggaaaagaggaagtgcttgacccagaagtactgtcggcgttcaaagaagac
atcgggagcaatggagaaaagttgcttaagtgcaacttcgtcaggcaatcaggatctgtc
tgggaagtcagacttgaagacaatggtgtgagtgtgaggtgtaaagttcctcctcctggc
tcaaccgactgctctggagtgacctctgaggaacctgaacaagtcaaggaaccgcatgca
cagatccgtcagaacgtgccagagaactcaccaccgaactcctcgttatgttaccagcaa
gaagagtttttagagggacagaagatggaggtctacatcacggcgataagtaccgctcag
aacttttggtgtcagtccgcggactctgaggacctcgagaagatcacatcgagcgtctcc
aaagtgtttgctgccgatcacaagagcgtcgacccggactccatcgccctcggcagcccg
tgcatcgccctcttttcagacgatggcttctggtatcgtgcagaggtcatcggcagagat
ggaggtgagctgtctgttctctttgtggactacgggaacaagacccgagtcaacttcacg
gacgtgagggaaatgccccccgacctgacggggactcctcgacaggccttcttgtgcgag
ctggaaggcttcgacgctgcacgcggaacttggcgcagcgacgcagtcgatgagttgtcg
gcgctcacgatggacaaagtgctacagctgaccgtcgccagagtagccggagaagcgggt
caaatcaaactgcttgtgcggcttgaatgtgaaggccaggtgataaatgaagccctgaga
acctggtggagaagcagcgcctcaacggaaaaccaacctgctgcttctggactgagccct
ccaagccaagcaccactgcaatgtgaagagcggagcacgggggagcttgtcgacccccac
gcagatatcttgccgtgtgacggcggcatggatggaattgggttacctcaactccagaac
aaagatgcccacggcattttgaccatgagctgtgacaagagtgcggtggaaagtgacaaa
ggagttgaagaagaggagatgttagtaatggaaataaacgagctagactacttcaattct
ctattggatgagaaccccacccaggccacggatgaatcggaggtcgcaacgaccggtttg
aagtctctgccaggagaggctcccaccggcagcgttgacatcatgacttcttctgatctg
accgaggacagagatcacagcaaggttgtcatggcgagggatgattctctgaccagcgcc
gctacagtgaccacgattcaggctgaagtgctgctgcccgactgcgtgcttcctgcattc
gacgtccctctcgagcaggagattgacggagcagatgtcccaaaggaggagctgccatgt
ggaaccacacatgttcagaatgacttgatgaccacagaggacaacgtggttcatcacggg
gatggacatacagccctgacggcagctaccgagacgccgacagctgctccccgagatcca
ggtgacgaggttaaggaaaagacctgtcctgtggaggtggagatctgctctgtggaggtg
gagacctgctctgtggaggtggagacctgctctgtggaggtggagacctgctctgtggag
gtggagacctgctctgtggaggtggagacctgctctgtggaggtggagacctgctctgtg
gaggtggagacctgctctgtggaggaggagacctgctctgtggaggtggagacctgctct
gtggacgaggagacctgctctgtggaggaggagacctgctctgtggaggaggagacctgc
tctgtggaggaggagacctgctctgtggaggaggagacctgctctgtggaggaggagacc
tgctctgtggaggcgaccggttctgtggatgcaacctcctgttcagtggaggaggcgccc
tgtactgtggtgaaggaggcgccctgtactgtggtgaaggaggcgccctgctctgtggag
gcgccctgctctgtggaggcgccctgctctgtggaggcgccctgcactgtggaggaggcg
ccctgcactgtggaggaggcgccctgtactgtggaggaggcgccctgctctgtggaggcg
ccctgcactgtggaggaggcgccctgctcggtggaggaggcgccctgctcggtggaggag
gcgccctgctcggtggaggaggcgccctgcactgtggaggcgccctgctcggtgaaggag
gcgccctgcactgtggaggaggcgccctgctcggtggaggaggcgccctgtactgtggag
gaggcgcccggcctgacggatgcctcaacagaccccaaccagccaagagatgaccgtctc
agcacgacatcagcagaggtccaacatgattccctgcgtccttgtagggagcttcaacaa
ctattacctgaagctctgggggagccagaactgggagagcgccccctgctggacgaggat
gagcataacgagaatcaagacgaggccgcggctcttcacctgacccgccccttcgctctg
ctctccgacgccgagccaccagagggtgccggccgccgtccccccgggagcgacccgatg
ggagaggagagccgtcggactgccgtctgcagaggtttacgtcaagaagatgtgagggag
gaggccgagcagcaggtgcatgcacccccccgccctagagaggacgtcggcgtgctgcag
gaagacgcgtgttcgtctgcggatgacggctttgaggcccagctgtcgggggtcactcat
ctctctctgctggtctgcggcggctctgaggtcctgctggcggagcagaacccagaggag
tga
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