Pseudoliparis swirei (Mariana hadal snailfish): 130203063
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Entry
130203063 CDS
T09868
Symbol
itgav
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145
Phagosome
pswi04148
Efferocytosis
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04514
Cell adhesion molecules
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130203063 (itgav)
04514 Cell adhesion molecules
130203063 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130203063 (itgav)
04148 Efferocytosis
130203063 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130203063 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130203063 (itgav)
04810 Regulation of actin cytoskeleton
130203063 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203063 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130203063 (itgav)
04515 Cell adhesion molecules [BR:
pswi04515
]
130203063 (itgav)
04090 CD molecules [BR:
pswi04090
]
130203063 (itgav)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130203063 (itgav)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130203063 (itgav)
Exosomal proteins of epithelial cells
130203063 (itgav)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130203063 (itgav)
CD molecules [BR:
pswi04090
]
Proteins
130203063 (itgav)
BRITE hierarchy
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
130203063
NCBI-ProteinID:
XP_056284930
LinkDB
All DBs
Position
2:complement(24644325..24703518)
Genome browser
AA seq
1028 aa
AA seq
DB search
MAAARPALAPLLLLCAWLRRGGSFNLEADSPAVFSGPEGSYFGFSVDFFIPPNHKRSDVL
VGAPRANTSSSGSVEERGAVYSCPWKSSASCQQLQFDITDDRRNADGDPMEFKSRQWFGA
SVRSDGEHILACAPLYQWSTFGVSEREPVGTCFLKKGSTVVEYSPCRSSANSPEGQGFCQ
AGFSVDFLKLISDDVAEIFSQFNSKYITAYSGTLATRSSSAQYDDSYLGYSVTVGDFNDD
GNEDYVTGVPRGEKALGYVNIFDGQTMESMVNFTGTQMAAYFGHSVAATDVNNDGLVDLL
VGAPLFMDRGSDGKLREVGQVSVYLGRGDFSFHAPQMLTGSEVYARYGSAIAALGDLDMD
GYNDVAISAPYGGPARYGLVYIHNGRPQGPSSSPSQVLQGKWASSYMPASFGYSMTGNTD
VDQNGYPDLLVGVFGADKAVLYRARPVISVNASLDITPQVINLEEKMCSLPGSTALVSCF
TVKYCLKASSRGAPAALNFRVDLLLDRAKPKDTKRVLFLHSQSVQFSKNMTVFNGKAPAC
EEQSVFLRNDRKLKDKITPISVVMEYSLDYQQAADATGLLPILDMSAPANVTKQAHILLD
CGDDNVCKPDLRLSVTSDREQIFIGDDNALNLEISAENRGEGAYEAELHVFLPQQADFTG
LSRRSQTLNRLSCNYKKENQTNMVVCDLGNPMKGGTKVLAVLGFNVHQLSEEDTSVKFDL
QMVSSNQFDNTSRLISSITKLAVRAEISLRGTSSPSQVLLPISNWRPQDPPVVGDDIGPQ
IVHVYELLNRGPSTISKAALEVDWPYQYHNGSLLYITRFDTDGPINCTTDIEINPLNVTT
NPLSSGKNTSGVPPRERESEGRNRNHVRKRDLESRDAQNDLQTLDCTTADCLRIRCQVGR
LERRKNAILFIYSRLAINNFLRTENQNRSYVVRSTVSFSVIEMPYKNLVSELPSNSTTVS
VSVVWVTDDPPPVPGWVVALAVLAGLLLLALLIFVMYKMGFFKRVRPPQEDCTEKEQLQP
EENGNTDA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggctcggcccgcgctcgccccgctcctcctgctctgcgcgtggctgcgacgc
ggaggctccttcaacctggaggcggacagcccggccgtgttctccgggccggagggcagc
tacttcggcttctccgtggacttcttcatcccccccaaccacaagaggtccgatgttctg
gtgggcgctccccgggcgaacacctcctcctctggcagcgtggaggagcgaggagcggtg
tacagctgtccctggaagagctccgcctcctgccagcagctgcagttcgacatcacagac
gaccggaggaacgctgacggagatccgatggagttcaagtccaggcagtggttcggtgct
tcagtccgctctgacggagaacacatcctggcctgtgctcccctgtatcagtggtcgacc
ttcggcgtctctgagcgagagccggtgggaacctgcttcctgaagaagggcagcacggtg
gtggagtactcgccctgcagatcaagtgccaactcccctgaggggcagggcttctgccaa
gccggcttcagcgtggacttcctcaagctgatctctgacgacgtggctgagatcttctct
cagttcaacagcaagtacatcacagcctacagcggcacgctggccaccaggtcctccagc
gcccagtacgacgacagctacctggggtactcggtgacggtcggagatttcaacgacgac
ggaaacgaagattacgtgaccggagtccctcgaggagaaaaggcgctgggttatgtgaac
atcttcgatggacagaccatggagtccatggtgaacttcacaggaactcagatggcggcc
tactttggacactcagtggctgctacagatgttaataatgacgggctggtggacctgctg
gtgggagcgccgctcttcatggaccggggctccgacgggaagctgagggaggtgggccag
gtgtcggtgtacctggggcgaggtgacttctccttccacgcccctcagatgctcacgggg
tccgaggtctacgccagatacggctctgccatcgcagcgctgggagacctggacatggac
gggtacaacgatgtggccatctcggctccctatgggggtcccgcccgctacggcctggtc
tacatccacaacggtcgtcctcagggtcctagctcctccccctctcaggtccttcaggga
aagtgggcgtccagctacatgcctgctagctttggctactccatgactggaaatactgat
gtcgaccagaatggttatccagatttattagtgggcgtgtttggagcagacaaagctgtt
ttatacagggcccgtccagtgatcagtgtgaacgcctccttggacatcacccctcaggtc
atcaacctggaggagaagatgtgttcgctgcccggctccaccgcgctggtgtcctgcttc
acagtgaagtactgtctgaaggccagcagccgtggagctccagctgccctcaacttccgc
gtggacctcctgttggaccgcgccaagcccaaggacactaagcgcgtcctcttcctccac
agccagagcgtccagttctccaagaacatgacggtgttcaacgggaaggccccggcctgc
gaggagcagagcgtcttcctcaggaacgacaggaagttaaaggataagatcactcccatc
tccgtggtgatggagtacagtctggactaccagcaggccgccgacgccaccgggctgctt
cctatcctcgacatgtcggctcctgccaacgtcaccaagcaggcccacatcctgttggac
tgtggagacgacaacgtctgtaagcctgacctgaggctgtctgtgaccagcgaccgcgaa
cagatcttcatcggagacgacaacgctctgaatctggagatcagcgcggagaaccgagga
gagggcgcctacgaggcggagctgcacgtgttcctgccgcagcaggcggacttcaccggg
ctgagccgccgcagccagaccctcaacaggttgtcctgcaattacaagaaggagaaccag
accaatatggtggtctgtgacctggggaaccccatgaagggaggaaccaaggtgctggcg
gtgctgggcttcaacgtgcaccagctgtcggaggaggacacctcggtgaagtttgacctg
cagatggtcagctctaatcagtttgacaacacgagtcgtctcatctccagcatcacaaag
ctggctgtacgcgctgagatctccttgagagggacgtcgtctccaagtcaggttctgctc
cccatctccaactggaggcctcaggaccctccggtggtgggagacgacatcgggcctcag
atcgtccacgtctacgagctgctgaacaggggtcccagcaccatcagcaaggcggcgctg
gaggtggactggccctaccagtaccacaacggctcgctgctctacatcacgcgcttcgac
accgacgggccgatcaactgcaccacggacatcgagatcaacccgctcaacgtgaccacg
aacccgctgtcctcggggaagaacaccagcggggttccacccagagaacgagagtcggag
ggacggaaccgaaaccacgtccgcaagagagacctggagtccagagacgctcagaacgac
ctgcagacactggactgcactacagctgactgtctgcgtatcagatgtcaggtcggtcgt
ctggagaggaggaagaatgccatcctcttcatctactcacggctggccatcaacaacttc
ctgaggacggagaaccagaatcgctcgtacgtggtgcgttccacggtttccttcagcgtc
atcgagatgccgtacaagaacctggtgtcagagctcccgtccaacagcaccaccgtgagt
gtgtccgtggtgtgggtgaccgacgaccccccgccggtccccgggtgggtcgtggcgctg
gccgtgctcgccggtcttctgttgctggcgctgctcatcttcgtcatgtacaagatgggg
ttcttcaagagggtccgccccccccaggaggactgcaccgagaaggagcagctgcagccc
gaggagaacggcaacacggacgcctag
DBGET
integrated database retrieval system
